Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.47□□□□□ -1.53
PROM1O43490 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.47□□□□□ -1.53
PROM1O43490 IGLV3-30-201ENST00000524362 298 ntBASIC5.47□□□□□ -1.53
PROM1O43490 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PROM1O43490 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.47□□□□□ -1.53
PROM1O43490 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.47□□□□□ -1.53
PROM1O43490 HMGN2P36-201ENST00000529541 409 ntBASIC5.47□□□□□ -1.53
PROM1O43490 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.47□□□□□ -1.53
PROM1O43490 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PROM1O43490 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.47□□□□□ -1.53
PROM1O43490 AC126615.2-201ENST00000553003 515 ntBASIC5.47□□□□□ -1.53
PROM1O43490 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.47□□□□□ -1.53
PROM1O43490 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.47□□□□□ -1.53
PROM1O43490 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.47□□□□□ -1.53
PROM1O43490 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.47□□□□□ -1.53
PROM1O43490 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.47□□□□□ -1.53
PROM1O43490 AL354943.1-201ENST00000572103 781 ntBASIC5.47□□□□□ -1.53
PROM1O43490 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.47□□□□□ -1.53
PROM1O43490 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
PROM1O43490 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.47□□□□□ -1.53
PROM1O43490 AP005136.1-201ENST00000579765 429 ntBASIC5.47□□□□□ -1.53
PROM1O43490 MIR4260-201ENST00000583107 67 ntBASIC5.47□□□□□ -1.53
PROM1O43490 COX6CP7-201ENST00000597056 208 ntBASIC5.47□□□□□ -1.53
PROM1O43490 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.47□□□□□ -1.53
PROM1O43490 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.47□□□□□ -1.53
PROM1O43490 AL020997.3-201ENST00000602843 359 ntBASIC5.47□□□□□ -1.53
PROM1O43490 FAM27E4-201ENST00000605259 342 ntBASIC5.47□□□□□ -1.53
PROM1O43490 HULC.1-201ENST00000612720 240 ntBASIC5.47□□□□□ -1.53
PROM1O43490 AL392048.1-201ENST00000613946 534 ntBASIC5.47□□□□□ -1.53
PROM1O43490 MIR6826-201ENST00000617808 98 ntBASIC5.47□□□□□ -1.53
PROM1O43490 AL603755.1-201ENST00000619504 163 ntBASIC5.47□□□□□ -1.53
PROM1O43490 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PROM1O43490 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PROM1O43490 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PROM1O43490 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PROM1O43490 AC079776.5-201ENST00000641920 211 ntBASIC5.47□□□□□ -1.53
PROM1O43490 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PROM1O43490 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PROM1O43490 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PROM1O43490 AL158152.1-201ENST00000602652 1435 ntBASIC5.47□□□□□ -1.53
PROM1O43490 BCORP1-203ENST00000513194 5093 ntBASIC5.47□□□□□ -1.53
PROM1O43490 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PROM1O43490 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PROM1O43490 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PROM1O43490 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.47□□□□□ -1.53
PROM1O43490 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PROM1O43490 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
PROM1O43490 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PROM1O43490 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
PROM1O43490 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PROM1O43490 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.46□□□□□ -1.53
PROM1O43490 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PROM1O43490 NXF4-202ENST00000416098 1465 ntBASIC5.46□□□□□ -1.53
PROM1O43490 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PROM1O43490 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
PROM1O43490 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.46□□□□□ -1.54
PROM1O43490 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 AC004076.2-201ENST00000620532 3323 ntBASIC5.46□□□□□ -1.54
PROM1O43490 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.46□□□□□ -1.54
PROM1O43490 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.46□□□□□ -1.54
PROM1O43490 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.46□□□□□ -1.54
PROM1O43490 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PROM1O43490 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PROM1O43490 RNA5SP91-201ENST00000390902 119 ntBASIC5.46□□□□□ -1.54
PROM1O43490 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.46□□□□□ -1.54
PROM1O43490 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.46□□□□□ -1.54
PROM1O43490 RN7SKP279-201ENST00000411383 298 ntBASIC5.46□□□□□ -1.54
PROM1O43490 AL356320.2-201ENST00000417263 507 ntBASIC5.46□□□□□ -1.54
PROM1O43490 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.46□□□□□ -1.54
PROM1O43490 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.46□□□□□ -1.54
PROM1O43490 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.46□□□□□ -1.54
PROM1O43490 CASP3P1-201ENST00000446037 609 ntBASIC5.46□□□□□ -1.54
PROM1O43490 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.46□□□□□ -1.54
PROM1O43490 AC244505.3-201ENST00000454598 187 ntBASIC5.46□□□□□ -1.54
PROM1O43490 RPL12P39-201ENST00000455456 496 ntBASIC5.46□□□□□ -1.54
PROM1O43490 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
PROM1O43490 AC114781.3-201ENST00000512083 142 ntBASIC5.46□□□□□ -1.54
PROM1O43490 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.46□□□□□ -1.54
PROM1O43490 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.46□□□□□ -1.54
PROM1O43490 AC139365.2-201ENST00000517972 253 ntBASIC5.46□□□□□ -1.54
PROM1O43490 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.46□□□□□ -1.54
PROM1O43490 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.46□□□□□ -1.54
PROM1O43490 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.46□□□□□ -1.54
PROM1O43490 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.46□□□□□ -1.54
PROM1O43490 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.46□□□□□ -1.54
PROM1O43490 AC027544.3-201ENST00000535082 757 ntBASIC5.46□□□□□ -1.54
PROM1O43490 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
PROM1O43490 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PROM1O43490 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.46□□□□□ -1.54
PROM1O43490 AC060780.2-201ENST00000589047 198 ntBASIC5.46□□□□□ -1.54
PROM1O43490 AC018638.7-201ENST00000605836 1114 ntBASIC5.46□□□□□ -1.54
PROM1O43490 AC022467.1-201ENST00000614738 749 ntBASIC5.46□□□□□ -1.54
PROM1O43490 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PROM1O43490 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.46□□□□□ -1.54
PROM1O43490 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PROM1O43490 AC053481.2-202ENST00000582394 1500 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms