Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC28A1O00337 CDH12P2-201ENST00000504393 298 ntBASIC4.76□□□□□ -1.65
SLC28A1O00337 snoU109.6-201ENST00000516831 118 ntBASIC4.76□□□□□ -1.65
SLC28A1O00337 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.76□□□□□ -1.65
SLC28A1O00337 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.76□□□□□ -1.65
SLC28A1O00337 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC28A1O00337 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC28A1O00337 AC090888.3-201ENST00000558917 509 ntBASIC4.76□□□□□ -1.65
SLC28A1O00337 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC28A1O00337 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC28A1O00337 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.76□□□□□ -1.65
SLC28A1O00337 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC28A1O00337 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC28A1O00337 EIF1P5-201ENST00000585002 234 ntBASIC4.76□□□□□ -1.65
SLC28A1O00337 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC28A1O00337 AC126915.2-201ENST00000610957 190 ntBASIC4.76□□□□□ -1.65
SLC28A1O00337 AL118556.2-201ENST00000614375 824 ntBASIC4.76□□□□□ -1.65
SLC28A1O00337 AC022106.2-201ENST00000620114 757 ntBASIC4.76□□□□□ -1.65
SLC28A1O00337 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC28A1O00337 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC28A1O00337 AL359922.3-201ENST00000624779 1670 ntBASIC4.76□□□□□ -1.65
SLC28A1O00337 SAMMSON-213ENST00000641336 1521 ntBASIC4.76□□□□□ -1.65
SLC28A1O00337 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
SLC28A1O00337 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC28A1O00337 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SLC28A1O00337 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC28A1O00337 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC28A1O00337 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SLC28A1O00337 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SLC28A1O00337 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SLC28A1O00337 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC28A1O00337 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC28A1O00337 CCNB2P1-201ENST00000399411 1150 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 AL359643.1-201ENST00000404109 423 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 AP000580.1-201ENST00000404439 358 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC28A1O00337 RN7SKP125-201ENST00000410481 302 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC28A1O00337 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC28A1O00337 RPS26P4-201ENST00000431743 355 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 NMNAT1P2-201ENST00000435192 860 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC28A1O00337 MTND2P21-201ENST00000436242 1042 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 CASP3P1-201ENST00000446037 609 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 RHEBP2-201ENST00000450289 600 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 AC144530.1-201ENST00000452862 555 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 AC092647.2-201ENST00000452998 253 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 AL389915.2-201ENST00000454576 441 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 AP000942.1-201ENST00000463969 747 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 AC112206.1-201ENST00000468416 477 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC28A1O00337 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC28A1O00337 COX6B1P5-201ENST00000509843 249 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC28A1O00337 IGKV2-18-201ENST00000522607 343 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC28A1O00337 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC28A1O00337 OR7E128P-201ENST00000532736 1024 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC28A1O00337 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC28A1O00337 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC28A1O00337 TVP23CP2-201ENST00000571473 623 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 AL512329.2-201ENST00000607350 548 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC28A1O00337 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC28A1O00337 AC008115.4-201ENST00000619780 775 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC28A1O00337 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC28A1O00337 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC28A1O00337 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC28A1O00337 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.75□□□□□ -1.65
SLC28A1O00337 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC28A1O00337 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC28A1O00337 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC28A1O00337 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SLC28A1O00337 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC28A1O00337 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SLC28A1O00337 ZNF733P-202ENST00000444809 1573 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC28A1O00337 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC28A1O00337 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC28A1O00337 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
SLC28A1O00337 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.74□□□□□ -1.65
SLC28A1O00337 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC28A1O00337 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC28A1O00337 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC28A1O00337 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC28A1O00337 OR1F12-201ENST00000402365 945 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 RN7SKP222-201ENST00000410651 315 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 EIF4A1P1-201ENST00000420241 934 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC28A1O00337 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC28A1O00337 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC28A1O00337 RPL12P11-201ENST00000439970 501 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC28A1O00337 HMGN2P25-201ENST00000486956 268 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC28A1O00337 AC104109.1-201ENST00000498563 436 ntBASIC4.74□□□□□ -1.65
SLC28A1O00337 HMGB1P46-201ENST00000520062 610 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms