Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 SNORA17A-201ENST00000391185 133 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AC093719.1-202ENST00000392735 373 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 SNORA77-201ENST00000408716 125 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 OR6C71P-201ENST00000432580 913 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 MAPRE1P3-201ENST00000435438 796 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 SCAND3P1-201ENST00000439854 1060 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AL353748.1-201ENST00000440753 474 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 RPL7P33-201ENST00000444159 742 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 RPS6P4-201ENST00000494693 758 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AC008694.2-201ENST00000517591 306 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 HMGB1P40-201ENST00000525121 540 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AL049872.1-201ENST00000556323 322 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 RPL7P50-201ENST00000600588 727 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 IMMP1LP3-201ENST00000604197 224 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AC034236.3-201ENST00000605999 461 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 RPSAP73-201ENST00000614820 330 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AL359757.1-201ENST00000623176 255 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 SNORA17.5-201ENST00000630429 132 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AL445437.1-201ENST00000623157 3087 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 AC092079.1-201ENST00000558620 1985 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC090971.4-201ENST00000560291 1800 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 HSPD1P11-201ENST00000508643 1702 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 OR10J6P-201ENST00000289731 930 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC019155.1-201ENST00000382242 574 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 ATP5HP3-201ENST00000396994 486 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 EIF4A1P3-201ENST00000411521 244 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 VN1R37P-201ENST00000419096 748 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 RPS4XP16-201ENST00000427198 791 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 FMO7P-201ENST00000436045 768 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 FHP1-201ENST00000442741 703 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 MTCO3P17-201ENST00000443775 513 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 EEF1B2P6-201ENST00000445713 673 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 HMGN1P36-201ENST00000446623 298 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 PPIAP20-201ENST00000449839 135 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 LARP7P4-201ENST00000481075 878 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 MIR3614-201ENST00000581261 86 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 HMGB2P1-201ENST00000591146 634 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AL139395.1-201ENST00000603662 160 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC019131.2-201ENST00000609071 870 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC008115.3-201ENST00000614874 549 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC126175.1-201ENST00000617041 758 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC007683.2-201ENST00000624681 714 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC074101.1-201ENST00000637861 241 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC007342.7-201ENST00000624610 2337 ntBASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RBFOX3A6NFN3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms