Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 AC004825.1-201ENST00000555068 586 ntBASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 FAM60CP-201ENST00000591086 664 ntBASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 AL133406.3-201ENST00000606817 541 ntBASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 MIR6768-201ENST00000610734 72 ntBASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 AL590410.1-201ENST00000617925 333 ntBASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 AC099494.2-201ENST00000623371 978 ntBASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 VN2R3P-201ENST00000422626 1412 ntBASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 AC114546.3-201ENST00000623582 1734 ntBASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.35□□□□□ -1.71
RHBDD3Q9Y3P4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AL592437.2-201ENST00000421655 2434 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 ATP5HP3-201ENST00000396994 486 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 LRRC37BP1-201ENST00000398851 714 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 RPS26P4-201ENST00000431743 355 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC092647.2-201ENST00000452998 253 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AL389915.2-201ENST00000454576 441 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 RPL7AP52-201ENST00000458096 790 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 RN7SL172P-201ENST00000460535 303 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 COPS8P2-201ENST00000473228 627 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC010350.1-201ENST00000504908 231 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 RNA5SP464-201ENST00000516251 108 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 OR11J2P-201ENST00000555298 907 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC007225.2-201ENST00000562529 256 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 MIR4489-201ENST00000578869 62 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 MIR3176-201ENST00000582210 90 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC022467.1-201ENST00000614738 749 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC087821.1-201ENST00000623639 567 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 ZNF652P1-201ENST00000442420 1309 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 CYP1D1P-201ENST00000416662 1433 ntBASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
RHBDD3Q9Y3P4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
RHBDD3Q9Y3P4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
RHBDD3Q9Y3P4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
RHBDD3Q9Y3P4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 PABPC1P6-201ENST00000445594 1829 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 SNORA77-201ENST00000408716 125 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AP000534.2-201ENST00000412729 568 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 CKS1BP6-201ENST00000424932 240 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 RPS29P9-201ENST00000440360 171 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 IFNWP4-201ENST00000453148 294 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 RNU6-1218P-201ENST00000458990 108 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AC079841.1-201ENST00000481228 950 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 RN7SL30P-201ENST00000488416 306 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 MTCYBP19-201ENST00000517463 1124 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms