Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AF186996.5-201ENST00000418098 904 ntBASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 RHOT1P3-201ENST00000436571 331 ntBASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 OTX2P1-201ENST00000450956 354 ntBASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 OR5M14P-201ENST00000506803 618 ntBASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 AC113430.1-201ENST00000506872 718 ntBASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 SNX18P1Y-201ENST00000616231 511 ntBASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 AC019206.1-201ENST00000621938 425 ntBASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 AC006840.1-201ENST00000623069 542 ntBASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 AC055839.1-201ENST00000634467 498 ntBASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 AC245100.2-201ENST00000454544 1679 ntBASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 DDX18P5-201ENST00000534547 1306 ntBASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRAPPC4Q9Y296 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC139713.2-215ENST00000641428 5037 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 SNORA70-201ENST00000384436 135 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 VDAC1P9-201ENST00000412766 841 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 PTP4A1P1-201ENST00000420539 515 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 PDSS1P1-201ENST00000422953 1114 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 TRGV7-201ENST00000427089 353 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC092162.1-201ENST00000432828 434 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 PRPF38AP2-201ENST00000438179 851 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 SCAND3P1-201ENST00000439854 1060 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC004453.1-201ENST00000487895 408 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC084033.1-201ENST00000550830 633 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC079075.1-201ENST00000559543 878 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC013244.1-201ENST00000604279 193 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 MIR7155-201ENST00000615925 56 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 AC234782.5-201ENST00000617723 324 ntBASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAPPC4Q9Y296 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 EOGT-210ENST00000615922 1931 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 MTCO1P22-201ENST00000604619 1360 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 MTND5P23-201ENST00000430812 1655 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AL645927.1-201ENST00000396783 406 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 LAP3P1-201ENST00000403648 294 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 RPL12P43-201ENST00000420608 499 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 PPIAP13-201ENST00000434706 478 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 RPL7P11-201ENST00000437586 658 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AC073052.1-201ENST00000440417 714 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 OR52Y1P-201ENST00000452418 828 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AC110749.1-201ENST00000462007 357 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AP000926.3-201ENST00000497201 299 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AC091917.2-201ENST00000505002 744 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 RNU6-943P-201ENST00000516960 98 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms