Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL20A1Q9P218 AL132640.2-201ENST00000559968 1698 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 RN7SKP145-201ENST00000363291 303 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL20A1Q9P218 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL20A1Q9P218 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 AC090804.1-201ENST00000448870 490 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 RPS3AP53-201ENST00000454716 778 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 AC091685.2-201ENST00000454924 864 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 snoU13.20-201ENST00000459180 104 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 HMGN2P25-201ENST00000486956 268 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 RNU6-276P-201ENST00000516114 96 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 AP001922.4-201ENST00000526967 290 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 AC087783.2-201ENST00000605070 562 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 AL049539.1-201ENST00000611964 459 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 AC087385.3-201ENST00000620477 187 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 AL360270.2-201ENST00000562952 5985 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL20A1Q9P218 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL20A1Q9P218 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL20A1Q9P218 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
COL20A1Q9P218 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL20A1Q9P218 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL20A1Q9P218 NXF4-202ENST00000416098 1465 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 AP002512.4-202ENST00000641599 4530 ntBASIC5.89□□□□□ -1.47
COL20A1Q9P218 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL20A1Q9P218 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL20A1Q9P218 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL20A1Q9P218 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL20A1Q9P218 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 AL121950.1-201ENST00000624993 2077 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL20A1Q9P218 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL20A1Q9P218 SNORA70.6-201ENST00000383934 134 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 RNU1-74P-201ENST00000384108 171 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 OR8V1P-201ENST00000395193 873 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 AL133270.1-201ENST00000402635 279 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 LIPT1P1-201ENST00000415870 1186 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC093422.3-201ENST00000428506 305 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 ETF1P3-201ENST00000430422 1160 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 MTATP6P17-201ENST00000431030 672 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 BX323845.1-201ENST00000432417 179 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 YWHAZP2-201ENST00000440317 728 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 KNOP1P3-201ENST00000446933 426 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 AL096803.2-201ENST00000450032 677 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 AL645937.3-201ENST00000453647 936 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 RN7SL197P-201ENST00000466981 299 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC026407.1-201ENST00000518369 204 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 NPM1P35-201ENST00000533043 868 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 AL049844.2-201ENST00000604280 628 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC005899.7-201ENST00000618199 588 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 AP004607.9-201ENST00000618202 316 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC022079.2-201ENST00000619739 566 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 AC010435.1-201ENST00000623353 1177 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL20A1Q9P218 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL20A1Q9P218 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL20A1Q9P218 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.88□□□□□ -1.47
COL20A1Q9P218 INTS6P1-201ENST00000504674 2530 ntBASIC5.88□□□□□ -1.47
COL20A1Q9P218 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms