Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AL110118.1-201ENST00000553543 400 ntBASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 AC105129.1-201ENST00000560250 297 ntBASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 AC073091.2-201ENST00000603205 907 ntBASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HMG20BQ9P0W2 Z98755.1-201ENST00000407015 1384 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 AC007382.1-201ENST00000624376 2618 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 THAP12P8-201ENST00000447914 2115 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 RNU1-82P-201ENST00000390851 165 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 RN7SKP106-201ENST00000410832 272 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 VN1R37P-201ENST00000419096 748 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 AC069213.2-201ENST00000420238 366 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 AC016831.4-201ENST00000438302 307 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 MTND4LP12-201ENST00000448237 295 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 RN7SL354P-201ENST00000469282 294 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 AC012414.7-202ENST00000622705 1090 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 SOCS5P3-201ENST00000425115 1576 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMG20BQ9P0W2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 AL049697.2-201ENST00000403708 294 ntBASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 AC098592.2-201ENST00000413158 265 ntBASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 AC119751.6-201ENST00000416712 186 ntBASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 RGS17P1-201ENST00000423358 553 ntBASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 AL451139.1-201ENST00000434718 346 ntBASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 AC002456.2-201ENST00000509356 380 ntBASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 MIR4472-2-201ENST00000582069 67 ntBASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 AC209154.1-201ENST00000582156 337 ntBASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 AC068790.4-201ENST00000602474 263 ntBASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 AL731566.1-201ENST00000620490 1937 ntBASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 MTCO1P22-201ENST00000604619 1360 ntBASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 AL359922.3-201ENST00000624779 1670 ntBASIC5.79□□□□□ -1.48
HMG20BQ9P0W2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMG20BQ9P0W2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.78□□□□□ -1.48
HMG20BQ9P0W2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMG20BQ9P0W2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMG20BQ9P0W2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HMG20BQ9P0W2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HMG20BQ9P0W2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMG20BQ9P0W2 RNU6-1331P-201ENST00000363658 106 ntBASIC5.78□□□□□ -1.48
HMG20BQ9P0W2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.78□□□□□ -1.48
HMG20BQ9P0W2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMG20BQ9P0W2 SNORA70F-201ENST00000384142 135 ntBASIC5.78□□□□□ -1.48
HMG20BQ9P0W2 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms