Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RN7SL172P-201ENST00000460535 303 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 RPS17P2-201ENST00000461663 408 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC009127.1-201ENST00000467090 155 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 SEPT7P6-201ENST00000469999 1143 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 RPL23AP65-201ENST00000475608 468 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 RN7SL799P-201ENST00000475891 298 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AF186190.1-201ENST00000517470 480 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC109635.6-201ENST00000525487 1113 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC095055.1-201ENST00000603472 1113 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AL137246.1-201ENST00000607072 977 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC126915.2-201ENST00000610957 190 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 MIR6826-201ENST00000617808 98 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC090527.3-201ENST00000619041 548 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC079298.2-201ENST00000623885 459 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC004808.2-201ENST00000627965 773 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC009643.2-201ENST00000603543 1448 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CCNB1IP1Q9NPC3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.69
CCNB1IP1Q9NPC3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 HSPA8P18-201ENST00000439846 1928 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 DUTP5-201ENST00000406790 469 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 RGS17P1-201ENST00000423358 553 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 GTF2IP2-201ENST00000424290 697 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AC073052.1-201ENST00000440417 714 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AC099063.2-201ENST00000446360 662 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 FAR2P1-206ENST00000449736 709 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 RPL7AP28-201ENST00000464513 571 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 UBA52P3-201ENST00000491303 382 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 RPS4XP18-201ENST00000495480 763 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 CCNHP1-201ENST00000513311 678 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 CYCSP28-201ENST00000534284 321 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AC134349.2-201ENST00000535136 910 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 SUMO2P15-201ENST00000604285 278 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AC104687.2-201ENST00000604442 342 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AC091979.2-201ENST00000607514 214 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AP005432.2-201ENST00000608162 586 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AC022467.1-201ENST00000614738 749 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 AC005086.4-201ENST00000623065 213 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 EOGT-210ENST00000615922 1931 ntBASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CCNB1IP1Q9NPC3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 AC235565.1-201ENST00000456962 1325 ntBASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 AC110792.3-201ENST00000595906 1614 ntBASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 RNU1-20P-201ENST00000363314 162 ntBASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 RN7SKP269-201ENST00000365545 319 ntBASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 NUDT19P3-201ENST00000404698 555 ntBASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 AL139039.2-201ENST00000407436 479 ntBASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 MIR1182-201ENST00000408363 97 ntBASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.51□□□□□ -1.69
CCNB1IP1Q9NPC3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms