Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RBMY2FP-202ENST00000420346 1263 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 DPH3P2-201ENST00000422618 250 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 RPL19P21-201ENST00000424919 591 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AL357632.1-201ENST00000426688 643 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AC012075.1-201ENST00000436549 580 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 HMGB1P12-201ENST00000438594 598 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 AL035551.1-201ENST00000446931 348 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 MGAT2P1-201ENST00000449718 797 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 TRBV1-201ENST00000476502 284 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 RN7SL705P-201ENST00000481678 294 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AL355076.1-201ENST00000484315 270 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 RPL23AP41-201ENST00000484754 458 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AC108120.1-201ENST00000506543 991 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USB1Q9BQ65 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 AP005435.4-201ENST00000529514 284 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USB1Q9BQ65 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 SRMP2-201ENST00000553832 916 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AC009779.4-201ENST00000554248 611 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 OR4N1P-201ENST00000554847 949 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 LARP7P2-201ENST00000575306 125 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 MIR4793-201ENST00000577502 87 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 RN7SL366P-201ENST00000577957 292 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 RN7SL154P-201ENST00000578043 324 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 MIR3689F-201ENST00000579617 66 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AC017100.2-201ENST00000584628 355 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 RPL35AP25-201ENST00000584631 330 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 MIR4424-201ENST00000585257 86 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 AC078938.1-201ENST00000620993 318 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 AC079456.1-201ENST00000624010 480 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USB1Q9BQ65 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
USB1Q9BQ65 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
USB1Q9BQ65 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
USB1Q9BQ65 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
USB1Q9BQ65 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.09□□□□□ -1.27
USB1Q9BQ65 AL512504.2-201ENST00000445455 1909 ntBASIC7.09□□□□□ -1.27
USB1Q9BQ65 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.28
USB1Q9BQ65 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC7.09□□□□□ -1.28
USB1Q9BQ65 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
USB1Q9BQ65 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.28
USB1Q9BQ65 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
USB1Q9BQ65 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
USB1Q9BQ65 BCL9P1-201ENST00000506012 2561 ntBASIC7.09□□□□□ -1.28
USB1Q9BQ65 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC7.09□□□□□ -1.28
USB1Q9BQ65 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.09□□□□□ -1.28
USB1Q9BQ65 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
USB1Q9BQ65 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
USB1Q9BQ65 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 SOD2P1-201ENST00000396543 562 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 RPS4XP9-201ENST00000405151 780 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC096632.1-201ENST00000427395 310 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 RPS24P8-201ENST00000431490 402 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 IGKV1OR-3-201ENST00000446944 348 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 HMGN3P1-201ENST00000453847 193 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC079168.1-201ENST00000458741 345 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC128716.1-201ENST00000475129 166 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 RPS4XP14-201ENST00000493072 781 ntBASIC7.08□□□□□ -1.28
USB1Q9BQ65 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.08□□□□□ -1.28
USB1Q9BQ65 FTH1P9-201ENST00000513251 355 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms