Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RNU6-368P-201ENST00000620928 107 ntBASIC3.8□□□□□ -1.8
LITAFQ99732 RNU6-538P-201ENST00000622329 107 ntBASIC3.8□□□□□ -1.8
LITAFQ99732 Z69908.1-201ENST00000622603 247 ntBASIC3.8□□□□□ -1.8
LITAFQ99732 AC098679.5-201ENST00000624394 571 ntBASIC3.8□□□□□ -1.8
LITAFQ99732 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC3.8□□□□□ -1.8
LITAFQ99732 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC3.8□□□□□ -1.8
LITAFQ99732 AF001550.2-201ENST00000636643 217 ntBASIC3.8□□□□□ -1.8
LITAFQ99732 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC3.8□□□□□ -1.8
LITAFQ99732 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LITAFQ99732 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC3.8□□□□□ -1.8
LITAFQ99732 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LITAFQ99732 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LITAFQ99732 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
LITAFQ99732 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC3.8□□□□□ -1.8
LITAFQ99732 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LITAFQ99732 AC114947.2-201ENST00000565748 2125 ntBASIC3.8□□□□□ -1.8
LITAFQ99732 AC104260.2-201ENST00000623551 3497 ntBASIC3.8□□□□□ -1.8
LITAFQ99732 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC3.8□□□□□ -1.8
LITAFQ99732 AC093311.1-201ENST00000506586 2021 ntBASIC3.8□□□□□ -1.8
LITAFQ99732 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LITAFQ99732 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LITAFQ99732 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
LITAFQ99732 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.8□□□□□ -1.8
LITAFQ99732 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 AC100810.3-201ENST00000633189 2240 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 AL137141.1-201ENST00000624622 4836 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC068870.1-201ENST00000563737 2455 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 MTND4P31-201ENST00000425607 1343 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 EEF1A1P21-201ENST00000512363 1344 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LITAFQ99732 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LITAFQ99732 Y_RNA.77-201ENST00000362962 107 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 SNORA62.2-201ENST00000364672 152 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LITAFQ99732 Y_RNA.505-201ENST00000384489 102 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 SNORA48.4-201ENST00000391089 134 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC104297.1-201ENST00000393779 870 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC026310.1-201ENST00000396004 378 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 RPS3AP26-201ENST00000398259 784 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC003045.1-201ENST00000398779 713 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 GSTA8P-201ENST00000404253 637 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 SNORA11C-201ENST00000408532 129 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC3.79□□□□□ -1.8
LITAFQ99732 RPL35AP31-201ENST00000418340 337 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC007435.1-201ENST00000421086 415 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC019178.2-201ENST00000423595 505 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 ATP5F1P1-201ENST00000433775 569 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC007790.1-201ENST00000439081 782 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 WDR82P2-201ENST00000444540 928 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AL845321.1-201ENST00000444603 348 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LITAFQ99732 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 COX4I1P2-201ENST00000447446 547 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 AL606490.1-201ENST00000452266 765 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 MTCO3P16-201ENST00000454456 754 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 RPS4XP12-201ENST00000461747 709 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 RN7SL91P-201ENST00000469313 291 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 RN7SL188P-201ENST00000469842 285 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.79□□□□□ -1.8
LITAFQ99732 GAPDHP36-201ENST00000480688 918 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 GAPDHP39-201ENST00000481866 979 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 ATP5LP5-201ENST00000483050 299 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.79□□□□□ -1.8
LITAFQ99732 DUTP1-201ENST00000493631 470 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LITAFQ99732 AC080014.1-201ENST00000496877 1201 ntBASIC3.79□□□□□ -1.8
LITAFQ99732 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC3.79□□□□□ -1.8
LITAFQ99732 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC3.79□□□□□ -1.8
LITAFQ99732 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC3.79□□□□□ -1.8
LITAFQ99732 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms