Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC020634.1-201ENST00000608701 549 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 AC069200.1-201ENST00000609511 323 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.62□□□□□ -1.19
IFT140Q96RY7 AC006065.6-201ENST00000625201 545 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
IFT140Q96RY7 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.61□□□□□ -1.19
IFT140Q96RY7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
IFT140Q96RY7 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.61□□□□□ -1.19
IFT140Q96RY7 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
IFT140Q96RY7 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
IFT140Q96RY7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC7.61□□□□□ -1.19
IFT140Q96RY7 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
IFT140Q96RY7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
IFT140Q96RY7 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
IFT140Q96RY7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC7.61□□□□□ -1.19
IFT140Q96RY7 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
IFT140Q96RY7 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
IFT140Q96RY7 RNA5SP513-201ENST00000364648 118 ntBASIC7.61□□□□□ -1.19
IFT140Q96RY7 RN7SKP33-201ENST00000410942 340 ntBASIC7.61□□□□□ -1.19
IFT140Q96RY7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC7.61□□□□□ -1.19
IFT140Q96RY7 AL158827.1-201ENST00000416300 391 ntBASIC7.61□□□□□ -1.19
IFT140Q96RY7 AC091564.1-201ENST00000464563 479 ntBASIC7.61□□□□□ -1.19
IFT140Q96RY7 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.61□□□□□ -1.19
IFT140Q96RY7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.61□□□□□ -1.19
IFT140Q96RY7 CCNG2P1-201ENST00000549521 1000 ntBASIC7.61□□□□□ -1.19
IFT140Q96RY7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC7.61□□□□□ -1.19
IFT140Q96RY7 AL451086.1-201ENST00000605596 223 ntBASIC7.61□□□□□ -1.19
IFT140Q96RY7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC7.61□□□□□ -1.19
IFT140Q96RY7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
IFT140Q96RY7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
IFT140Q96RY7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
IFT140Q96RY7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
IFT140Q96RY7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
IFT140Q96RY7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
IFT140Q96RY7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
IFT140Q96RY7 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
IFT140Q96RY7 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
IFT140Q96RY7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
IFT140Q96RY7 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
IFT140Q96RY7 MAPK10-372ENST00000641954 3413 ntBASIC7.6□□□□□ -1.19
IFT140Q96RY7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
IFT140Q96RY7 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.6□□□□□ -1.19
IFT140Q96RY7 AL354766.1-201ENST00000423396 542 ntBASIC7.6□□□□□ -1.19
IFT140Q96RY7 HMGB3P5-201ENST00000428894 612 ntBASIC7.6□□□□□ -1.19
IFT140Q96RY7 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.6□□□□□ -1.19
IFT140Q96RY7 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC7.6□□□□□ -1.19
IFT140Q96RY7 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
IFT140Q96RY7 snoU13.29-201ENST00000459370 104 ntBASIC7.6□□□□□ -1.19
IFT140Q96RY7 PARP4P3-201ENST00000510265 317 ntBASIC7.6□□□□□ -1.19
IFT140Q96RY7 NPM1P41-201ENST00000512920 831 ntBASIC7.6□□□□□ -1.19
IFT140Q96RY7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.6□□□□□ -1.19
IFT140Q96RY7 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC7.6□□□□□ -1.19
IFT140Q96RY7 AC053481.4-201ENST00000583164 216 ntBASIC7.6□□□□□ -1.19
IFT140Q96RY7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.6□□□□□ -1.19
IFT140Q96RY7 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC7.6□□□□□ -1.19
IFT140Q96RY7 BNIP3P11-201ENST00000603878 563 ntBASIC7.6□□□□□ -1.19
IFT140Q96RY7 uc_338.13-201ENST00000618243 179 ntBASIC7.6□□□□□ -1.19
IFT140Q96RY7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC7.6□□□□□ -1.19
IFT140Q96RY7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
IFT140Q96RY7 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
IFT140Q96RY7 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.6□□□□□ -1.19
IFT140Q96RY7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
IFT140Q96RY7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
IFT140Q96RY7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
IFT140Q96RY7 AC104260.2-201ENST00000623551 3497 ntBASIC7.6□□□□□ -1.19
IFT140Q96RY7 CPHL1P-201ENST00000461341 3407 ntBASIC7.59□□□□□ -1.19
IFT140Q96RY7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
IFT140Q96RY7 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.59□□□□□ -1.19
IFT140Q96RY7 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.59□□□□□ -1.19
IFT140Q96RY7 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
IFT140Q96RY7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
IFT140Q96RY7 AL445584.1-201ENST00000431451 330 ntBASIC7.59□□□□□ -1.19
IFT140Q96RY7 H3F3BP1-201ENST00000440551 403 ntBASIC7.59□□□□□ -1.19
IFT140Q96RY7 AC020890.1-201ENST00000491837 504 ntBASIC7.59□□□□□ -1.19
IFT140Q96RY7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.59□□□□□ -1.19
IFT140Q96RY7 MIR6875-201ENST00000617506 72 ntBASIC7.59□□□□□ -1.19
IFT140Q96RY7 MIR6891-201ENST00000618788 93 ntBASIC7.59□□□□□ -1.19
IFT140Q96RY7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
IFT140Q96RY7 AC009120.7-201ENST00000623452 780 ntBASIC7.59□□□□□ -1.19
IFT140Q96RY7 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
IFT140Q96RY7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
IFT140Q96RY7 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
IFT140Q96RY7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
IFT140Q96RY7 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
IFT140Q96RY7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
IFT140Q96RY7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC7.59□□□□□ -1.2
IFT140Q96RY7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC7.59□□□□□ -1.2
IFT140Q96RY7 AC011447.7-201ENST00000624228 1590 ntBASIC7.59□□□□□ -1.2
IFT140Q96RY7 AC073342.2-201ENST00000595842 1800 ntBASIC7.58□□□□□ -1.2
IFT140Q96RY7 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.58□□□□□ -1.2
IFT140Q96RY7 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
IFT140Q96RY7 TCP11X1-202ENST00000622971 1372 ntBASIC7.58□□□□□ -1.2
IFT140Q96RY7 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
IFT140Q96RY7 RPL21P65-201ENST00000406094 466 ntBASIC7.58□□□□□ -1.2
IFT140Q96RY7 AL139095.3-201ENST00000419672 1203 ntBASIC7.58□□□□□ -1.2
IFT140Q96RY7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC7.58□□□□□ -1.2
IFT140Q96RY7 AC111000.6-201ENST00000514471 709 ntBASIC7.58□□□□□ -1.2
IFT140Q96RY7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.58□□□□□ -1.2
IFT140Q96RY7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.58□□□□□ -1.2
IFT140Q96RY7 AC005899.7-201ENST00000618199 588 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms