Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC133552.1-201ENST00000569988 4007 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AC139713.2-215ENST00000641428 5037 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AL672167.1-203ENST00000641299 2975 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 MIR659-201ENST00000384963 97 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 SDHCP2-201ENST00000398565 501 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AL359643.1-201ENST00000404109 423 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 RPS16P5-201ENST00000406501 404 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AC069213.2-201ENST00000420238 366 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 RPL34P6-201ENST00000432390 345 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 RPL23AP93-201ENST00000440847 484 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 TPT1P1-201ENST00000458495 518 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 RPL23AP72-201ENST00000492447 435 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AC008897.1-201ENST00000494006 347 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AC026782.2-201ENST00000510845 636 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AC137768.1-201ENST00000549998 553 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AC023762.1-201ENST00000603280 584 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 AC073342.3-201ENST00000624211 193 ntBASIC3.8□□□□□ -1.8
GAFA1Q96PS6 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GAFA1Q96PS6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AC012618.3-205ENST00000637896 1496 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 DHX40P1-201ENST00000588725 1412 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 MFSD8-216ENST00000641147 4009 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 NEAT1-202ENST00000501122 22743 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 OR4K15-201ENST00000305051 1216 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 RNA5SP505-201ENST00000364748 108 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 SETP9-201ENST00000423837 832 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 RPS12P10-201ENST00000427031 377 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 RPL21P91-201ENST00000429231 479 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AC011753.3-201ENST00000443436 406 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AL162591.2-201ENST00000449634 317 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AC007686.1-201ENST00000488511 463 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AL133243.1-201ENST00000614487 366 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AL049536.1-201ENST00000625043 744 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 MAPK10-303ENST00000641324 3959 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 AC053481.2-202ENST00000582394 1500 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 EIF3EP2-201ENST00000423042 1814 ntBASIC3.79□□□□□ -1.8
GAFA1Q96PS6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
GAFA1Q96PS6 VN2R3P-201ENST00000422626 1412 ntBASIC3.78□□□□□ -1.8
GAFA1Q96PS6 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.78□□□□□ -1.8
GAFA1Q96PS6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GAFA1Q96PS6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms