Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC008549.2-201ENST00000333482 706 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AL391422.1-201ENST00000402155 436 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 RPL5P19-201ENST00000404228 893 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 RN7SKP114-201ENST00000410327 279 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC115283.1-201ENST00000427353 400 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AL162388.1-201ENST00000450912 352 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 OR2A3P-201ENST00000493774 953 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC015864.1-201ENST00000496512 544 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 OR51K1P-201ENST00000510214 950 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 SNORD46.2-201ENST00000516021 102 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 CYCSP28-201ENST00000534284 321 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC134349.2-201ENST00000535136 910 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC135001.1-201ENST00000544546 283 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 EIF1P5-201ENST00000585002 234 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 IMMP1LP1-201ENST00000605170 488 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC020634.1-201ENST00000608701 549 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC026368.1-201ENST00000614934 690 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC090527.3-201ENST00000619041 548 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AC074276.2-201ENST00000619891 348 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 EOGT-210ENST00000615922 1931 ntBASIC3.58□□□□□ -1.84
AP1S3Q96PC3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
AP1S3Q96PC3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 RNA5SP502-201ENST00000362694 119 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 RNA5SP513-201ENST00000364648 118 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 RHOT1P2-201ENST00000366423 333 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 SNORA66-201ENST00000384792 133 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 ATP5HP3-201ENST00000396994 486 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 LYPLA1P3-201ENST00000402650 695 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 VN1R12P-201ENST00000403778 876 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 AL136116.2-201ENST00000404020 785 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 RN7SKP216-201ENST00000411050 312 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 DDX39BP1-205ENST00000422507 192 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 RGS17P1-201ENST00000423358 553 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 AC108075.1-201ENST00000424692 529 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 BX323845.1-201ENST00000432417 179 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 AC012075.1-201ENST00000436549 580 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 RPL7P28-201ENST00000437739 740 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 YWHAEP1-201ENST00000453697 763 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 RN7SL205P-201ENST00000490174 284 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 RN7SL547P-201ENST00000490793 290 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 AC083829.1-201ENST00000503756 657 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 PSMA2P2-201ENST00000504319 686 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 PPBPP1-201ENST00000510807 373 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 IGLVIV-53-201ENST00000520107 367 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.57□□□□□ -1.84
AP1S3Q96PC3 DEFB109D-201ENST00000529497 240 ntBASIC3.57□□□□□ -1.84
AP1S3Q96PC3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms