Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 RNU4-64P-201ENST00000410795 131 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 HNRNPA1P29-201ENST00000426409 879 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 RPL23AP4-201ENST00000427757 463 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC002069.1-201ENST00000429649 1159 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 ARAFP2-201ENST00000440565 559 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 CNOT7P2-201ENST00000441051 832 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 WASF1P1-201ENST00000447560 1131 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 EEF1B2P3-201ENST00000447718 678 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC104306.1-201ENST00000449702 371 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 RN7SL552P-201ENST00000462094 276 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC098583.1-201ENST00000480875 255 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC113367.2-201ENST00000505749 160 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC116347.2-201ENST00000514912 523 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 RNU6-718P-201ENST00000516166 105 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 RNU6-506P-201ENST00000516553 94 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 RN7SKP183-201ENST00000517169 324 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 RN7SL475P-201ENST00000583379 298 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 LSM1P2-201ENST00000604911 322 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 SNORA74.4-201ENST00000607595 199 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC009779.8-202ENST00000607990 932 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC024560.3-201ENST00000608482 349 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC090970.3-201ENST00000612566 866 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC090517.2-201ENST00000614966 680 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 PPBPP2-201ENST00000513150 1362 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 CR383658.2-201ENST00000547576 1525 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 PABPC1P9-201ENST00000426076 1612 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC245100.2-201ENST00000454544 1679 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC011447.7-201ENST00000624228 1590 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 TEX21P-201ENST00000447107 1476 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 MIR217-201ENST00000384817 110 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 LDHAP2-201ENST00000437325 985 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 UBE2V1P3-201ENST00000439651 417 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AL512326.1-201ENST00000443050 721 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 POU5F1P5-201ENST00000445059 658 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 TIMM8BP2-201ENST00000445940 251 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AL034418.1-201ENST00000448675 860 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC002075.1-201ENST00000457396 676 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 OR9M1P-201ENST00000459641 921 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 RPL31P58-201ENST00000469001 379 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 TRBV8-2-201ENST00000475637 270 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 RN7SL714P-201ENST00000487050 298 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 OR4G11P-201ENST00000492842 939 ntBASIC5.99□□□□□ -1.45
PTCHD1Q96NR3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms