Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL035458.1-201ENST00000433096 585 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 USP9YP24-201ENST00000434374 697 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 USP9YP17-201ENST00000444617 696 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 TRY2P-201ENST00000448860 689 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 CALM1P2-201ENST00000452941 448 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC134050.1-201ENST00000495088 933 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC119751.5-201ENST00000514077 770 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 RNU6-615P-201ENST00000516065 106 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC018442.3-201ENST00000523025 183 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC027544.3-201ENST00000535082 757 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AL049872.1-201ENST00000556323 322 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 MIR4505-201ENST00000582238 73 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC097065.2-201ENST00000608159 533 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 AL121890.2-201ENST00000617644 465 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 AP004607.9-201ENST00000618202 316 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS50Q96JG6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS50Q96JG6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS50Q96JG6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS50Q96JG6 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS50Q96JG6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS50Q96JG6 MFSD8-239ENST00000641590 2479 ntBASIC5.46□□□□□ -1.54
VPS50Q96JG6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS50Q96JG6 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS50Q96JG6 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 SNORA51.1-201ENST00000363243 140 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 MTCO2P20-201ENST00000437339 673 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 MTCYBP12-201ENST00000440559 1134 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 AL450996.1-201ENST00000445574 1202 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 RN7SL214P-201ENST00000487317 265 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC245036.5-201ENST00000596330 847 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 FO393422.1-201ENST00000603908 708 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS50Q96JG6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 PART1_2.1-201ENST00000612397 250 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 RNA5SP440-201ENST00000612665 119 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC090607.5-201ENST00000615692 224 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC011815.3-201ENST00000624194 473 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 SAMMSON-227ENST00000642114 1199 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 AC007938.2-201ENST00000604666 2634 ntBASIC5.45□□□□□ -1.54
VPS50Q96JG6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS50Q96JG6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS50Q96JG6 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS50Q96JG6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS50Q96JG6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS50Q96JG6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms