Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
UBA3Q8TBC4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UBA3Q8TBC4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
UBA3Q8TBC4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 STX3-208ENST00000641815 3236 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 BMS1P3-201ENST00000372011 932 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 RNU6-729P-201ENST00000384399 107 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 AL080315.1-201ENST00000406055 466 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 USP9YP9-201ENST00000429406 715 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 AC016831.4-201ENST00000438302 307 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 TDGF1P1-201ENST00000445734 527 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 RPL12P20-201ENST00000475538 479 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 AC011005.3-201ENST00000491624 395 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 OR5M2P-201ENST00000529003 936 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 MIR4675-201ENST00000577898 77 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 MIR4270-201ENST00000581799 70 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 AL022322.2-201ENST00000624072 20397 ntBASIC4.97□□□□□ -1.61
UBA3Q8TBC4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
UBA3Q8TBC4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.96□□□□□ -1.61
UBA3Q8TBC4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
UBA3Q8TBC4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.96□□□□□ -1.61
UBA3Q8TBC4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
UBA3Q8TBC4 AC003985.2-201ENST00000562268 1669 ntBASIC4.96□□□□□ -1.61
UBA3Q8TBC4 AL359922.3-201ENST00000624779 1670 ntBASIC4.96□□□□□ -1.61
UBA3Q8TBC4 AL672167.1-203ENST00000641299 2975 ntBASIC4.96□□□□□ -1.61
UBA3Q8TBC4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 SETP15-201ENST00000412724 337 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AC140479.3-201ENST00000418944 1126 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AC013268.2-201ENST00000420753 337 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 H2AFZP5-201ENST00000446960 382 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AC108463.1-201ENST00000450258 347 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 RPS4XP12-201ENST00000461747 709 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AC020890.1-201ENST00000491837 504 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AL110118.1-201ENST00000553543 400 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 SETP1-201ENST00000556014 845 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AP005262.1-201ENST00000582646 997 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AL137072.1-201ENST00000603444 466 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AC087283.1-201ENST00000604029 1074 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AC011815.3-201ENST00000624194 473 ntBASIC4.96□□□□□ -1.62
UBA3Q8TBC4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
UBA3Q8TBC4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
UBA3Q8TBC4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.95□□□□□ -1.62
UBA3Q8TBC4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
UBA3Q8TBC4 AP000580.1-201ENST00000404439 358 ntBASIC4.95□□□□□ -1.62
UBA3Q8TBC4 RN7SKP106-201ENST00000410832 272 ntBASIC4.95□□□□□ -1.62
UBA3Q8TBC4 ATG4AP1-201ENST00000416893 538 ntBASIC4.95□□□□□ -1.62
UBA3Q8TBC4 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.95□□□□□ -1.62
UBA3Q8TBC4 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.95□□□□□ -1.62
UBA3Q8TBC4 AC090142.1-201ENST00000465776 462 ntBASIC4.95□□□□□ -1.62
UBA3Q8TBC4 AC006967.1-201ENST00000467608 589 ntBASIC4.95□□□□□ -1.62
UBA3Q8TBC4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.95□□□□□ -1.62
UBA3Q8TBC4 AC098583.1-201ENST00000480875 255 ntBASIC4.95□□□□□ -1.62
UBA3Q8TBC4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
UBA3Q8TBC4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.95□□□□□ -1.62
UBA3Q8TBC4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.95□□□□□ -1.62
UBA3Q8TBC4 AC105129.1-201ENST00000560250 297 ntBASIC4.95□□□□□ -1.62
UBA3Q8TBC4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms