Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 FTX-210ENST00000603037 8347 ntTSL 5 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AC006946.1-201ENST00000429106 328 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 PCNPP1-201ENST00000552501 511 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AC005252.1-201ENST00000604518 1063 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AC004232.3-201ENST00000622977 525 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AL359757.1-201ENST00000623176 255 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AC073136.1-201ENST00000449426 2884 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 RALGAPA1P1-201ENST00000443361 6232 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 TMSB10P2-201ENST00000416049 131 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AC011276.1-201ENST00000469688 323 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 SSR3-206ENST00000476217 807 ntTSL 3 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AC083829.1-201ENST00000503756 657 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AC010350.1-201ENST00000504908 231 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 ZYXP1-201ENST00000617638 118 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AC091932.2-201ENST00000623014 291 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 AP001153.1-201ENST00000641024 338 ntBASIC1.47□□□□□ -2.17
SYNE1Q8NF91 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC1.47□□□□□ -2.17
SYNE1Q8NF91 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC1.46□□□□□ -2.17
SYNE1Q8NF91 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC1.46□□□□□ -2.17
SYNE1Q8NF91 MIR208A-201ENST00000362287 71 ntBASIC1.46□□□□□ -2.17
SYNE1Q8NF91 RNA5SP387-201ENST00000364226 106 ntBASIC1.46□□□□□ -2.17
SYNE1Q8NF91 RPS3AP23-201ENST00000401762 784 ntBASIC1.46□□□□□ -2.17
SYNE1Q8NF91 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.17
SYNE1Q8NF91 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC1.46□□□□□ -2.17
SYNE1Q8NF91 HMGN1P9-201ENST00000515212 298 ntBASIC1.46□□□□□ -2.17
SYNE1Q8NF91 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC1.46□□□□□ -2.17
SYNE1Q8NF91 PARP1P2-201ENST00000556806 195 ntBASIC1.46□□□□□ -2.17
SYNE1Q8NF91 AL583832.1-201ENST00000603227 784 ntBASIC1.46□□□□□ -2.17
SYNE1Q8NF91 USP45-204ENST00000369233 2514 ntTSL 5 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AL136164.3-201ENST00000624429 3978 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 MAPK6PS2-201ENST00000379571 2060 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 SAMMSON-226ENST00000642089 1582 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AL136116.2-201ENST00000404020 785 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AL445189.1-201ENST00000405722 338 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AC079809.1-201ENST00000415468 276 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AC012400.1-201ENST00000518452 381 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 MAL2-201ENST00000522112 573 ntTSL 4 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AP000619.2-201ENST00000546014 969 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AC011487.3-201ENST00000593607 453 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AL445567.2-201ENST00000618935 498 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AC034229.5-201ENST00000624258 185 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 NCLP2-201ENST00000416078 1462 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AC009238.2-201ENST00000431026 355 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 snoU13.1-201ENST00000459157 104 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 RN7SL652P-201ENST00000577769 300 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 CDC42EP3P1-201ENST00000601004 764 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 AL356608.1-201ENST00000610034 820 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 ASNSP1-204ENST00000641977 1664 ntBASIC1.46□□□□□ -2.18
SYNE1Q8NF91 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC1.46□□□□□ -2.18
SYNE1Q8NF91 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms