Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 OR51H2P-202ENST00000641424 3046 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 IRF5P1-201ENST00000504852 2164 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AC107027.3-201ENST00000565095 3473 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 RNU6-729P-201ENST00000384399 107 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 U3.30-201ENST00000391308 210 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AC007068.1-201ENST00000396690 844 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AP000580.1-201ENST00000404439 358 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 RPL36AP10-201ENST00000421785 322 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AC012519.1-201ENST00000424588 610 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 NPM1P48-201ENST00000436002 853 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 OR52J1P-201ENST00000450596 932 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AC021006.3-201ENST00000530771 192 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AC133555.2-201ENST00000550213 292 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AC044860.2-201ENST00000561005 179 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 RN7SL802P-201ENST00000577858 299 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 MIR5699-201ENST00000578903 90 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 MIR4646-201ENST00000580775 63 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AC233280.2-201ENST00000603917 1070 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AL161912.3-201ENST00000605404 628 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 FAM27B-201ENST00000610601 213 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 MIR7155-201ENST00000615925 56 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 NCLP2-201ENST00000416078 1462 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AL121950.1-201ENST00000624993 2077 ntBASIC5.32□□□□□ -1.56
CCDC65Q8IXS2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 CASC19-255ENST00000641733 1385 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AL445487.1-201ENST00000415694 1580 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 SNORA51.8-201ENST00000384234 132 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 RN7SKP278-201ENST00000410504 342 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 COX6B1P1-201ENST00000415962 213 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 OR51A6P-201ENST00000418680 1004 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AC007559.1-201ENST00000428736 355 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 RPS26P4-201ENST00000431743 355 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 PTMAP6-201ENST00000439110 327 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AL031584.1-201ENST00000447169 754 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AC010733.1-201ENST00000451515 401 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AC239798.3-201ENST00000454459 408 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 RPS5P7-201ENST00000456664 608 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AC022795.1-201ENST00000473808 480 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AC104971.1-201ENST00000495117 578 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 RNU1-6P-201ENST00000516290 144 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AP000676.2-201ENST00000529711 301 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 FKBP1BP1-201ENST00000553366 325 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 AC015804.1-201ENST00000622935 435 ntBASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC65Q8IXS2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 AL645608.4-201ENST00000423619 154 ntBASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 PSMD10P3-201ENST00000437000 448 ntBASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 RN7SL329P-201ENST00000467740 299 ntBASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 RPL7P16-201ENST00000479738 738 ntBASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 RN7SL214P-201ENST00000487317 265 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms