Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AC073594.1-201ENST00000462065 364 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 RPS7P7-201ENST00000463499 571 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 CBX3P3-201ENST00000508108 532 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AC106038.2-201ENST00000520706 568 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 MTCYBP41-201ENST00000528913 1123 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 RPA2P1-201ENST00000556557 721 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 DPPA3P2-202ENST00000557188 1219 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AC068768.2-201ENST00000602352 343 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AP001267.4-201ENST00000602598 545 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AL136363.2-201ENST00000604173 851 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AL096712.1-201ENST00000614561 159 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AC091932.2-201ENST00000623014 291 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 AC073488.3-201ENST00000631611 778 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TRIM48Q8IWZ4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 NAMPTP1-201ENST00000440465 2514 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 RBMY1HP-201ENST00000382759 1389 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 Y_RNA.516-201ENST00000384541 124 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 RNU6-253P-201ENST00000384730 105 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 RPS27AP11-201ENST00000402798 447 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC105402.1-201ENST00000413336 545 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC245884.2-201ENST00000426257 404 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 DPRXP1-201ENST00000426312 460 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 DPY19L1P2-201ENST00000426647 915 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 FTH1P16-201ENST00000435241 552 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AL031667.1-201ENST00000440222 725 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 DNAJC19P5-201ENST00000443295 316 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 ZNF733P-202ENST00000444809 1573 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 CDC27P1-201ENST00000445384 715 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 ZNF619P1-201ENST00000446539 752 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 CFL1P4-201ENST00000451536 498 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 MTCYBP1-201ENST00000454315 1119 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC110749.1-201ENST00000462007 357 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 RN7SL221P-201ENST00000466190 281 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC092865.4-201ENST00000477936 615 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 OR11I1P-201ENST00000486033 954 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC083795.1-201ENST00000491760 320 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC025458.1-201ENST00000506046 166 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC079395.1-201ENST00000510981 262 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 RNU6-1004P-201ENST00000516584 111 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 RNA5SP434-201ENST00000516647 121 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 SNORA81.2-201ENST00000516868 170 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AP002963.1-201ENST00000530590 184 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 MIR3189-201ENST00000578735 73 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 MIR4310-201ENST00000582950 57 ntBASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM48Q8IWZ4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms