Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC073464.3-201ENST00000422564 712 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC090018.1-201ENST00000434369 367 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 RPL12P3-201ENST00000440080 396 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC012512.1-201ENST00000446594 718 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC073850.1-201ENST00000449243 255 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 HMGB1P5-202ENST00000451497 985 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 CLIC4P1-201ENST00000453177 535 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC069304.1-201ENST00000491593 704 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AP006245.2-201ENST00000522004 300 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 OR4A46P-201ENST00000527255 933 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 MIR4646-201ENST00000580775 63 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AL137072.1-201ENST00000603444 466 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC008814.1-201ENST00000603797 406 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC135178.6-201ENST00000605314 398 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC090525.3-201ENST00000605601 189 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AP004607.9-201ENST00000618202 316 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AL645927.2-201ENST00000618350 349 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC090527.3-201ENST00000619041 548 ntBASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF39Q86UA1 HSPA8P14-201ENST00000552265 1805 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 MIR589-201ENST00000385238 99 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 NCSTNP1-201ENST00000406229 144 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AC099063.2-201ENST00000446360 662 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 HMGB1P26-201ENST00000452520 628 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 DNAJB5P1-201ENST00000454004 806 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 MTND2P6-201ENST00000455337 1030 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 MTND2P30-201ENST00000456663 382 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 RNU6-1004P-201ENST00000516584 111 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 OR11J2P-201ENST00000555298 907 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AC084759.1-201ENST00000561168 290 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AC009597.2-201ENST00000604659 592 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AC096553.1-201ENST00000605169 829 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AL356094.1-201ENST00000624663 1212 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 AC009313.2-201ENST00000417893 1941 ntBASIC5.34□□□□□ -1.55
PRPF39Q86UA1 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF39Q86UA1 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PRPF39Q86UA1 AL603750.1-201ENST00000624216 1717 ntBASIC5.34□□□□□ -1.56
PRPF39Q86UA1 SCARNA15-201ENST00000607520 4325 ntBASIC5.34□□□□□ -1.56
PRPF39Q86UA1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.34□□□□□ -1.56
PRPF39Q86UA1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
PRPF39Q86UA1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF39Q86UA1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF39Q86UA1 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF39Q86UA1 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF39Q86UA1 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF39Q86UA1 AL731532.2-201ENST00000623542 1953 ntBASIC5.33□□□□□ -1.56
PRPF39Q86UA1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF39Q86UA1 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PRPF39Q86UA1 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 418.6 ms