Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 OR2BH1P-201ENST00000608850 864 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC009974.1-201ENST00000608881 455 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 MIR6889-201ENST00000613185 59 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC244100.4-201ENST00000617747 388 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 RNU6-368P-201ENST00000620928 107 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 RNU6-538P-201ENST00000622329 107 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC104985.3-201ENST00000623479 597 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AP001962.1-201ENST00000624114 559 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC024023.1-201ENST00000624530 922 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC119674.1-212ENST00000641155 993 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC008691.1-209ENST00000642094 814 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC007342.5-201ENST00000571340 2142 ntBASIC4.82□□□□□ -1.64
SHFQ7M4L6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHFQ7M4L6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.82□□□□□ -1.64
SHFQ7M4L6 AC104623.2-202ENST00000623477 4002 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 NXF4-202ENST00000416098 1465 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 VN2R3P-201ENST00000422626 1412 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 OR55B1P-203ENST00000641518 2602 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHFQ7M4L6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHFQ7M4L6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHFQ7M4L6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 ZNF652P1-201ENST00000442420 1309 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AL121950.1-201ENST00000624993 2077 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHFQ7M4L6 OR9G4-201ENST00000302957 984 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC023490.2-201ENST00000359859 470 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 RN7SKP275-201ENST00000364626 301 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 RNU4-2-201ENST00000365668 141 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHFQ7M4L6 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHFQ7M4L6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHFQ7M4L6 RPS27AP11-201ENST00000402798 447 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC233289.1-201ENST00000403700 508 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 RNA5SP487-201ENST00000410186 122 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 PCNPP4-201ENST00000414817 517 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 OR6D1P-201ENST00000436165 939 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 OR10R1P-201ENST00000441524 1141 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 TRY2P-201ENST00000448860 689 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 RNA5SP103-201ENST00000459503 118 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC092754.1-201ENST00000472975 479 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 RPS4XP6-201ENST00000477670 797 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC005412.2-201ENST00000492004 341 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC113420.1-201ENST00000507903 571 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 MTND6P2-201ENST00000512226 524 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC011611.5-201ENST00000552477 578 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 MRPS21P7-201ENST00000566937 238 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC022884.2-201ENST00000578535 580 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC134669.1-201ENST00000581275 672 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 VN1R87P-201ENST00000596706 487 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC067773.1-201ENST00000603284 1094 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC009027.1-201ENST00000604510 479 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 Z82195.1-201ENST00000604558 398 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.81□□□□□ -1.64
SHFQ7M4L6 AL365181.4-201ENST00000609800 547 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC009159.2-201ENST00000617603 606 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC048341.3-201ENST00000619323 491 ntBASIC4.81□□□□□ -1.64
SHFQ7M4L6 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms