Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ATG10-208ENST00000513634 618 ntTSL 2 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 RNU6-264P-201ENST00000517134 104 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AP003396.4-201ENST00000527574 265 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC092375.1-201ENST00000550410 637 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 MIR3913-1-201ENST00000577744 102 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC006504.6-201ENST00000590142 199 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AL355802.3-201ENST00000607571 545 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 AL512624.1-201ENST00000613638 469 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 YWHAEP7-203ENST00000622054 312 ntBASIC8.11□□□□□ -1.11
RC3H1Q5TC82 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
RC3H1Q5TC82 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 MIR323A-201ENST00000362199 86 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 SNORD56.2-201ENST00000363242 71 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 RNU6-374P-201ENST00000364146 108 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 RNU6-707P-201ENST00000364647 95 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 RNU6-463P-201ENST00000384340 107 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 RNU6-1122P-201ENST00000384449 107 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 SNORA75.4-201ENST00000391278 119 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 RN7SKP121-201ENST00000410842 305 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AL365184.2-201ENST00000431139 435 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AL591212.2-201ENST00000433923 257 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AL022238.1-201ENST00000442557 355 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 RPL30P9-201ENST00000465586 330 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 LARP1BP2-201ENST00000486594 519 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AC093677.1-201ENST00000514414 678 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AC005832.3-201ENST00000537929 631 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AC044913.1-201ENST00000557200 430 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AC090236.2-201ENST00000587933 1101 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 BNIP3P10-201ENST00000605360 577 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 MIR1321-201ENST00000637766 79 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 HYDIN2-203ENST00000614586 13885 ntBASIC8.1□□□□□ -1.11
RC3H1Q5TC82 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RC3H1Q5TC82 AC023818.2-201ENST00000623817 2304 ntBASIC8.09□□□□□ -1.11
RC3H1Q5TC82 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.09□□□□□ -1.11
RC3H1Q5TC82 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RC3H1Q5TC82 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RC3H1Q5TC82 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RC3H1Q5TC82 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RC3H1Q5TC82 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC8.09□□□□□ -1.11
RC3H1Q5TC82 AC015871.3-201ENST00000618835 2261 ntBASIC8.09□□□□□ -1.11
RC3H1Q5TC82 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.09□□□□□ -1.11
RC3H1Q5TC82 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RC3H1Q5TC82 ZNF33BP1-201ENST00000452497 1834 ntBASIC8.09□□□□□ -1.11
RC3H1Q5TC82 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RC3H1Q5TC82 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RC3H1Q5TC82 Y_RNA.132-201ENST00000363421 102 ntBASIC8.09□□□□□ -1.11
RC3H1Q5TC82 RN7SKP292-201ENST00000365522 317 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms