Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MIR1178-201ENST00000408396 91 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 UBE2V1P11-201ENST00000411559 285 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 SETP15-201ENST00000412724 337 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 AP000534.2-201ENST00000412729 568 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.84□□□□□ -1.63
CLDN20P56880 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.84□□□□□ -1.63
CLDN20P56880 FAM96AP1-201ENST00000430879 482 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.84□□□□□ -1.63
CLDN20P56880 AC069540.1-201ENST00000446320 988 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 CYCSP42-201ENST00000450823 238 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 HSPE1P22-201ENST00000456856 327 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.84□□□□□ -1.63
CLDN20P56880 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.84□□□□□ -1.63
CLDN20P56880 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.84□□□□□ -1.63
CLDN20P56880 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.84□□□□□ -1.63
CLDN20P56880 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CLDN20P56880 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN20P56880 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.84□□□□□ -1.63
CLDN20P56880 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.84□□□□□ -1.63
CLDN20P56880 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.84□□□□□ -1.63
CLDN20P56880 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
CLDN20P56880 AL390726.5-202ENST00000564800 256 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.84□□□□□ -1.63
CLDN20P56880 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.84□□□□□ -1.63
CLDN20P56880 AC005341.1-201ENST00000571086 708 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 AC008507.2-201ENST00000588402 1176 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.84□□□□□ -1.63
CLDN20P56880 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN20P56880 AL512329.2-201ENST00000607350 548 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 AL135786.2-201ENST00000608422 615 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 AC027449.1-201ENST00000608890 407 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 AC245100.7-201ENST00000609678 442 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.84□□□□□ -1.63
CLDN20P56880 AC073342.3-201ENST00000624211 193 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 AC013437.2-201ENST00000639587 677 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.84□□□□□ -1.63
CLDN20P56880 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN20P56880 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CLDN20P56880 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLDN20P56880 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLDN20P56880 PCAT14-202ENST00000627127 3935 ntBASIC4.84□□□□□ -1.64
CLDN20P56880 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CLDN20P56880 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLDN20P56880 AL121950.1-201ENST00000624993 2077 ntBASIC4.84□□□□□ -1.64
CLDN20P56880 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLDN20P56880 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLDN20P56880 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CLDN20P56880 PABPC1P6-201ENST00000445594 1829 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN20P56880 AL022393.1-201ENST00000625142 1677 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN20P56880 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CLDN20P56880 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN20P56880 MFSD8-213ENST00000641134 1327 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN20P56880 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN20P56880 RNU6-1005P-201ENST00000384519 107 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 RNU1-149P-201ENST00000390870 161 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CLDN20P56880 GAPDHP15-201ENST00000398586 975 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 DBIP1-201ENST00000401435 260 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 AL359643.1-201ENST00000404109 423 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.83□□□□□ -1.64
CLDN20P56880 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN20P56880 Z68694.1-201ENST00000413929 841 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN20P56880 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN20P56880 AC008173.1-201ENST00000418901 264 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 MTCYBP32-201ENST00000427945 1084 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.83□□□□□ -1.64
CLDN20P56880 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN20P56880 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN20P56880 AC044797.1-201ENST00000445744 679 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 GAPDHP25-201ENST00000447061 1001 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 SEPT7P3-201ENST00000455017 621 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN20P56880 PSMC1P13-201ENST00000458195 985 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN20P56880 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.83□□□□□ -1.64
CLDN20P56880 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN20P56880 AC110760.3-202ENST00000515177 371 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 SCARNA20.4-201ENST00000516969 131 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN20P56880 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN20P56880 AC013701.1-201ENST00000522657 465 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 AC100784.1-201ENST00000522790 310 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.83□□□□□ -1.64
CLDN20P56880 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN20P56880 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.83□□□□□ -1.64
CLDN20P56880 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN20P56880 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN20P56880 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.83□□□□□ -1.64
CLDN20P56880 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN20P56880 AC023762.1-201ENST00000603280 584 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN20P56880 AC126544.2-201ENST00000625174 749 ntBASIC4.83□□□□□ -1.64
CLDN20P56880 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CLDN20P56880 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN20P56880 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms