Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AC127381.1-201ENST00000555979 939 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC005242.1-201ENST00000585658 438 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC119751.7-201ENST00000600494 245 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 SDR42E1P1-201ENST00000611327 477 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CACNA2D1P54289 MIR6133-201ENST00000617057 108 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC241377.1-201ENST00000619797 406 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 AL049536.1-201ENST00000625043 744 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 CYP4F35P-202ENST00000636121 390 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 MIR3974-201ENST00000637126 96 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 SAMMSON-209ENST00000641222 1100 ntBASIC5.7□□□□□ -1.5
CACNA2D1P54289 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CACNA2D1P54289 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CACNA2D1P54289 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CACNA2D1P54289 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CACNA2D1P54289 OR55B1P-203ENST00000641518 2602 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CACNA2D1P54289 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 AC003973.3-201ENST00000624863 2822 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CACNA2D1P54289 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CACNA2D1P54289 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CACNA2D1P54289 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CACNA2D1P54289 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 MTHFD2P5-201ENST00000320415 844 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 SNORA70.6-201ENST00000383934 134 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 DBIP1-201ENST00000401435 260 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 RN7SKP97-201ENST00000410966 333 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 AP000534.2-201ENST00000412729 568 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 MTND2P18-201ENST00000419962 1030 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 NPM1P26-201ENST00000426339 738 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 RPS26P4-201ENST00000431743 355 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 MTCYBP29-201ENST00000436327 1006 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CACNA2D1P54289 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 AL163193.1-201ENST00000444895 788 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 RN7SL188P-201ENST00000469842 285 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 RPL21P18-201ENST00000469899 480 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 BET1P1-201ENST00000482276 359 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 RPS21P4-201ENST00000487122 248 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 RN7SL447P-201ENST00000494711 245 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 AC023424.1-201ENST00000496058 459 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 AC008638.1-201ENST00000506035 866 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 FABP5P6-201ENST00000510588 409 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 ASNSP4-201ENST00000511103 447 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 MRPS36P3-201ENST00000519284 130 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CACNA2D1P54289 AL049779.2-201ENST00000553847 315 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 NMNAT1P5-201ENST00000559657 841 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 AGGF1P6-201ENST00000569213 976 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 MIR4433B-201ENST00000581329 102 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CACNA2D1P54289 SNX6P1-201ENST00000601728 1224 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 AC016769.4-201ENST00000616893 535 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CACNA2D1P54289 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CACNA2D1P54289 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CACNA2D1P54289 AL078621.3-201ENST00000623707 2042 ntBASIC5.69□□□□□ -1.5
CACNA2D1P54289 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.68□□□□□ -1.5
CACNA2D1P54289 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CACNA2D1P54289 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CACNA2D1P54289 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.68□□□□□ -1.5
CACNA2D1P54289 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CACNA2D1P54289 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.68□□□□□ -1.5
CACNA2D1P54289 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
CACNA2D1P54289 AC011493.1-201ENST00000596753 1632 ntBASIC5.68□□□□□ -1.5
CACNA2D1P54289 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CACNA2D1P54289 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CACNA2D1P54289 Y_RNA.169-201ENST00000363745 96 ntBASIC5.68□□□□□ -1.5
CACNA2D1P54289 RNU1-149P-201ENST00000390870 161 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms