Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC009974.1-201ENST00000608881 455 ntBASIC5.69□□□□□ -1.5
COPAP53621 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COPAP53621 MIR6837-201ENST00000620884 64 ntBASIC5.69□□□□□ -1.5
COPAP53621 AL078595.3-201ENST00000623815 1166 ntBASIC5.69□□□□□ -1.5
COPAP53621 AC024023.1-201ENST00000624530 922 ntBASIC5.69□□□□□ -1.5
COPAP53621 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.69□□□□□ -1.5
COPAP53621 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COPAP53621 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.69□□□□□ -1.5
COPAP53621 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
COPAP53621 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COPAP53621 SEPT7P7-201ENST00000420492 1301 ntBASIC5.69□□□□□ -1.5
COPAP53621 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPAP53621 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.69□□□□□ -1.5
COPAP53621 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPAP53621 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPAP53621 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COPAP53621 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COPAP53621 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPAP53621 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPAP53621 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPAP53621 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPAP53621 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPAP53621 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.68□□□□□ -1.5
COPAP53621 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPAP53621 GAPDHP24-201ENST00000328713 983 ntBASIC5.68□□□□□ -1.5
COPAP53621 RNA5SP183-201ENST00000362452 119 ntBASIC5.68□□□□□ -1.5
COPAP53621 U6.112-201ENST00000384129 70 ntBASIC5.68□□□□□ -1.5
COPAP53621 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COPAP53621 RNU4-34P-201ENST00000410431 124 ntBASIC5.68□□□□□ -1.5
COPAP53621 AC009302.1-201ENST00000417147 390 ntBASIC5.68□□□□□ -1.5
COPAP53621 RNGTTP1-201ENST00000420965 728 ntBASIC5.68□□□□□ -1.5
COPAP53621 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.68□□□□□ -1.5
COPAP53621 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.68□□□□□ -1.5
COPAP53621 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.68□□□□□ -1.5
COPAP53621 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.68□□□□□ -1.5
COPAP53621 DPY19L1P2-201ENST00000426647 915 ntBASIC5.68□□□□□ -1.5
COPAP53621 NPM1P22-201ENST00000427761 952 ntBASIC5.68□□□□□ -1.5
COPAP53621 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.68□□□□□ -1.5
COPAP53621 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.68□□□□□ -1.5
COPAP53621 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPAP53621 AC093890.1-201ENST00000502554 540 ntBASIC5.68□□□□□ -1.5
COPAP53621 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.68□□□□□ -1.5
COPAP53621 AC024558.1-201ENST00000505008 528 ntBASIC5.68□□□□□ -1.5
COPAP53621 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPAP53621 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.68□□□□□ -1.5
COPAP53621 IGLV3-24-201ENST00000517477 197 ntBASIC5.68□□□□□ -1.5
COPAP53621 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.68□□□□□ -1.5
COPAP53621 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.68□□□□□ -1.5
COPAP53621 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.68□□□□□ -1.5
COPAP53621 OR8G5-201ENST00000524943 1041 ntBASIC5.68□□□□□ -1.5
COPAP53621 AC011611.5-201ENST00000552477 578 ntBASIC5.68□□□□□ -1.5
COPAP53621 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.68□□□□□ -1.5
COPAP53621 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.68□□□□□ -1.5
COPAP53621 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.68□□□□□ -1.5
COPAP53621 AC012616.1-201ENST00000600294 197 ntBASIC5.68□□□□□ -1.5
COPAP53621 AC002069.2-201ENST00000603580 883 ntBASIC5.68□□□□□ -1.5
COPAP53621 Z82195.1-201ENST00000604558 398 ntBASIC5.68□□□□□ -1.5
COPAP53621 AC008115.4-201ENST00000619780 775 ntBASIC5.68□□□□□ -1.5
COPAP53621 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.68□□□□□ -1.5
COPAP53621 AC021106.3-201ENST00000623925 531 ntBASIC5.68□□□□□ -1.5
COPAP53621 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COPAP53621 AC136428.4-201ENST00000634254 1155 ntBASIC5.68□□□□□ -1.5
COPAP53621 AC005332.5-201ENST00000591222 2919 ntBASIC5.68□□□□□ -1.5
COPAP53621 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPAP53621 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.68□□□□□ -1.5
COPAP53621 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COPAP53621 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COPAP53621 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COPAP53621 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.67□□□□□ -1.5
COPAP53621 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.67□□□□□ -1.5
COPAP53621 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.67□□□□□ -1.5
COPAP53621 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.67□□□□□ -1.5
COPAP53621 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPAP53621 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPAP53621 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPAP53621 RNU5B-1-201ENST00000363286 116 ntBASIC5.67□□□□□ -1.5
COPAP53621 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
COPAP53621 AL603865.2-201ENST00000401679 213 ntBASIC5.67□□□□□ -1.5
COPAP53621 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.67□□□□□ -1.5
COPAP53621 AC105402.1-201ENST00000413336 545 ntBASIC5.67□□□□□ -1.5
COPAP53621 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.67□□□□□ -1.5
COPAP53621 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPAP53621 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.67□□□□□ -1.5
COPAP53621 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.67□□□□□ -1.5
COPAP53621 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.67□□□□□ -1.5
COPAP53621 MTND2P8-201ENST00000450555 1025 ntBASIC5.67□□□□□ -1.5
COPAP53621 RPL10P17-201ENST00000453852 316 ntBASIC5.67□□□□□ -1.5
COPAP53621 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.67□□□□□ -1.5
COPAP53621 RN7SL51P-201ENST00000468230 285 ntBASIC5.67□□□□□ -1.5
COPAP53621 RPS4XP6-201ENST00000477670 797 ntBASIC5.67□□□□□ -1.5
COPAP53621 AC068587.2-201ENST00000478386 781 ntBASIC5.67□□□□□ -1.5
COPAP53621 AC037198.2-201ENST00000478845 733 ntBASIC5.67□□□□□ -1.5
COPAP53621 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPAP53621 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.67□□□□□ -1.5
COPAP53621 AC021146.5-201ENST00000503544 545 ntBASIC5.67□□□□□ -1.5
COPAP53621 AC006499.3-201ENST00000506077 748 ntBASIC5.67□□□□□ -1.5
COPAP53621 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.67□□□□□ -1.5
COPAP53621 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.67□□□□□ -1.5
COPAP53621 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.67□□□□□ -1.5
COPAP53621 RNA5SP92-201ENST00000516437 110 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms