Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.64□□□□□ -1.51
NUP98P52948 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP98P52948 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.64□□□□□ -1.51
NUP98P52948 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP98P52948 BPIFA4P-203ENST00000603168 689 ntBASIC5.64□□□□□ -1.51
NUP98P52948 SNX18P1Y-201ENST00000616231 511 ntBASIC5.64□□□□□ -1.51
NUP98P52948 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP98P52948 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP98P52948 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.64□□□□□ -1.51
NUP98P52948 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP98P52948 AC097063.1-201ENST00000426714 1797 ntBASIC5.64□□□□□ -1.51
NUP98P52948 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
NUP98P52948 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP98P52948 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.64□□□□□ -1.51
NUP98P52948 RPL23AP26-201ENST00000412728 464 ntBASIC5.64□□□□□ -1.51
NUP98P52948 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP98P52948 TDGF1P1-201ENST00000445734 527 ntBASIC5.64□□□□□ -1.51
NUP98P52948 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP98P52948 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP98P52948 SNORA31.9-201ENST00000516429 84 ntBASIC5.64□□□□□ -1.51
NUP98P52948 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP98P52948 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NUP98P52948 AC005831.1-201ENST00000624384 1697 ntBASIC5.64□□□□□ -1.51
NUP98P52948 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP98P52948 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP98P52948 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP98P52948 TTC41P-205ENST00000551270 3963 ntBASIC5.63□□□□□ -1.51
NUP98P52948 AC097374.1-203ENST00000400783 485 ntBASIC5.63□□□□□ -1.51
NUP98P52948 RPL17P36-201ENST00000420302 549 ntBASIC5.63□□□□□ -1.51
NUP98P52948 RPL35P6-201ENST00000490024 372 ntBASIC5.63□□□□□ -1.51
NUP98P52948 RPS27AP16-201ENST00000492222 470 ntBASIC5.63□□□□□ -1.51
NUP98P52948 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP98P52948 AP001804.2-201ENST00000533932 910 ntBASIC5.63□□□□□ -1.51
NUP98P52948 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP98P52948 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP98P52948 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP98P52948 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC5.63□□□□□ -1.51
NUP98P52948 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP98P52948 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP98P52948 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP98P52948 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP98P52948 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP98P52948 AL121657.1-201ENST00000327215 531 ntBASIC5.62□□□□□ -1.51
NUP98P52948 MIR331-201ENST00000362302 94 ntBASIC5.62□□□□□ -1.51
NUP98P52948 SNRPFP1-201ENST00000414761 252 ntBASIC5.62□□□□□ -1.51
NUP98P52948 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP98P52948 AC012519.1-201ENST00000424588 610 ntBASIC5.62□□□□□ -1.51
NUP98P52948 RPS12P10-201ENST00000427031 377 ntBASIC5.62□□□□□ -1.51
NUP98P52948 RPL7P33-201ENST00000444159 742 ntBASIC5.62□□□□□ -1.51
NUP98P52948 NUTF2P3-201ENST00000448540 384 ntBASIC5.62□□□□□ -1.51
NUP98P52948 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.62□□□□□ -1.51
NUP98P52948 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP98P52948 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP98P52948 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.62□□□□□ -1.51
NUP98P52948 AC113403.1-201ENST00000604910 193 ntBASIC5.62□□□□□ -1.51
NUP98P52948 AC091979.2-201ENST00000607514 214 ntBASIC5.62□□□□□ -1.51
NUP98P52948 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP98P52948 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NUP98P52948 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP98P52948 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP98P52948 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP98P52948 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP98P52948 AL359922.3-201ENST00000624779 1670 ntBASIC5.62□□□□□ -1.51
NUP98P52948 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP98P52948 EIF2AP4-201ENST00000424793 1781 ntBASIC5.62□□□□□ -1.51
NUP98P52948 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP98P52948 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP98P52948 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP98P52948 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
NUP98P52948 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP98P52948 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.62□□□□□ -1.51
NUP98P52948 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP98P52948 SNORA70C-201ENST00000384538 135 ntBASIC5.62□□□□□ -1.51
NUP98P52948 MIR3065-201ENST00000390137 79 ntBASIC5.62□□□□□ -1.51
NUP98P52948 RPS27AP11-201ENST00000402798 447 ntBASIC5.62□□□□□ -1.51
NUP98P52948 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP98P52948 BTF3P10-201ENST00000433415 495 ntBASIC5.62□□□□□ -1.51
NUP98P52948 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP98P52948 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP98P52948 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP98P52948 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NUP98P52948 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.62□□□□□ -1.51
NUP98P52948 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP98P52948 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP98P52948 AC024941.1-201ENST00000612250 334 ntBASIC5.62□□□□□ -1.51
NUP98P52948 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP98P52948 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NUP98P52948 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP98P52948 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP98P52948 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
NUP98P52948 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP98P52948 MFSD8-220ENST00000641243 1422 ntBASIC5.61□□□□□ -1.51
NUP98P52948 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NUP98P52948 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.61□□□□□ -1.51
NUP98P52948 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
NUP98P52948 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.61□□□□□ -1.51
NUP98P52948 LARP1BP1-201ENST00000506036 1359 ntBASIC5.61□□□□□ -1.51
NUP98P52948 RPL21P65-201ENST00000406094 466 ntBASIC5.61□□□□□ -1.51
NUP98P52948 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP98P52948 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms