Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC104849.1-201ENST00000462623 405 ntBASIC5.03□□□□□ -1.6
TNFSF9P41273 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFSF9P41273 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFSF9P41273 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.03□□□□□ -1.6
TNFSF9P41273 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.03□□□□□ -1.6
TNFSF9P41273 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.03□□□□□ -1.6
TNFSF9P41273 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFSF9P41273 AL359757.1-201ENST00000623176 255 ntBASIC5.03□□□□□ -1.6
TNFSF9P41273 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TNFSF9P41273 AC135352.1-201ENST00000506173 1418 ntBASIC5.03□□□□□ -1.6
TNFSF9P41273 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TNFSF9P41273 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFSF9P41273 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNFSF9P41273 KARSP3-201ENST00000571212 1504 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNFSF9P41273 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TNFSF9P41273 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TNFSF9P41273 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
TNFSF9P41273 AL391684.1-202ENST00000641293 1636 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 ZNF137P-201ENST00000456718 1920 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TNFSF9P41273 OR4K15-201ENST00000305051 1216 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNFSF9P41273 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNFSF9P41273 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNFSF9P41273 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TNFSF9P41273 RAB28P1-201ENST00000411517 641 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 AL445213.1-201ENST00000412589 747 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNFSF9P41273 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.02□□□□□ -1.61
TNFSF9P41273 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.02□□□□□ -1.61
TNFSF9P41273 RPS26P4-201ENST00000431743 355 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.02□□□□□ -1.61
TNFSF9P41273 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.02□□□□□ -1.61
TNFSF9P41273 YWHAZP2-201ENST00000440317 728 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 ARL2BPP10-201ENST00000446487 531 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.02□□□□□ -1.61
TNFSF9P41273 SCARNA10-201ENST00000459255 330 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 AC020890.1-201ENST00000491837 504 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.02□□□□□ -1.61
TNFSF9P41273 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.02□□□□□ -1.61
TNFSF9P41273 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
TNFSF9P41273 AC010547.7-201ENST00000570323 333 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 AL133338.2-201ENST00000604292 736 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 AL731566.2-201ENST00000618971 317 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TNFSF9P41273 OR14L1P-202ENST00000641545 3009 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 SMG1P4-204ENST00000523028 4131 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.02□□□□□ -1.61
TNFSF9P41273 AC000374.1-201ENST00000434698 1745 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNFSF9P41273 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNFSF9P41273 AL359922.3-201ENST00000624779 1670 ntBASIC5.02□□□□□ -1.61
TNFSF9P41273 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.02□□□□□ -1.61
TNFSF9P41273 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.01□□□□□ -1.61
TNFSF9P41273 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 SMC4P1-201ENST00000414479 527 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.01□□□□□ -1.61
TNFSF9P41273 REREP1Y-201ENST00000422655 198 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 AC092017.2-201ENST00000427600 362 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 DNAJC19P7-201ENST00000428811 344 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 RPL23AP1-201ENST00000428990 471 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFSF9P41273 REREP2Y-201ENST00000439103 200 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.01□□□□□ -1.61
TNFSF9P41273 AC012512.1-201ENST00000446594 718 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.01□□□□□ -1.61
TNFSF9P41273 NDUFA5P9-201ENST00000472609 340 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.01□□□□□ -1.61
TNFSF9P41273 RN7SKP92-201ENST00000517266 244 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.01□□□□□ -1.61
TNFSF9P41273 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.01□□□□□ -1.61
TNFSF9P41273 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.01□□□□□ -1.61
TNFSF9P41273 AC015912.2-201ENST00000571053 181 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.01□□□□□ -1.61
TNFSF9P41273 AC130352.1-201ENST00000602979 661 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFSF9P41273 PROS2P-201ENST00000474651 1951 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TNFSF9P41273 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFSF9P41273 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFSF9P41273 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TNFSF9P41273 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNFSF9P41273 AL672167.1-203ENST00000641299 2975 ntBASIC5.01□□□□□ -1.61
TNFSF9P41273 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TNFSF9P41273 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TNFSF9P41273 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TNFSF9P41273 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
TNFSF9P41273 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms