Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HOXA9P31269 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.05□□□□□ -1.6
HOXA9P31269 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HOXA9P31269 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXA9P31269 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HOXA9P31269 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA9P31269 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA9P31269 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA9P31269 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HOXA9P31269 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXA9P31269 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
HOXA9P31269 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA9P31269 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXA9P31269 AL022322.2-201ENST00000624072 20397 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA9P31269 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA9P31269 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
HOXA9P31269 RN7SKP267-201ENST00000410381 285 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 PTP4A1P1-201ENST00000420539 515 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.04□□□□□ -1.6
HOXA9P31269 RPL12P28-201ENST00000430852 489 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA9P31269 AL136455.1-201ENST00000441083 1240 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXA9P31269 AL589765.3-201ENST00000446084 462 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 EIF2S2P2-201ENST00000447161 982 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA9P31269 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXA9P31269 RPL7AP10-201ENST00000481016 791 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 AL049874.2-201ENST00000492636 288 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 RN7SL558P-201ENST00000497468 299 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 IGBP1P5-201ENST00000507524 1000 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 AC026688.1-201ENST00000520639 1168 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 PARP1P2-201ENST00000556806 195 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 AC084759.1-201ENST00000561168 290 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 AC009852.2-201ENST00000567898 485 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 AC127024.5-201ENST00000580085 462 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 SNORA74C-1-201ENST00000580726 201 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 AC005191.1-201ENST00000603950 358 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXA9P31269 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXA9P31269 AL359757.1-201ENST00000623176 255 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HOXA9P31269 AL442639.1-201ENST00000625030 1899 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA9P31269 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXA9P31269 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HOXA9P31269 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA9P31269 AC005005.4-201ENST00000623789 16698 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HOXA9P31269 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXA9P31269 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXA9P31269 TRIM51GP-201ENST00000534741 1350 ntBASIC5.04□□□□□ -1.6
HOXA9P31269 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA9P31269 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA9P31269 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA9P31269 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA9P31269 AC022417.1-201ENST00000624768 1303 ntBASIC5.03□□□□□ -1.6
HOXA9P31269 AC097461.1-201ENST00000568928 2821 ntBASIC5.03□□□□□ -1.6
HOXA9P31269 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HOXA9P31269 RNU4-44P-201ENST00000363050 141 ntBASIC5.03□□□□□ -1.6
HOXA9P31269 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA9P31269 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA9P31269 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HOXA9P31269 RPS17P8-201ENST00000434525 335 ntBASIC5.03□□□□□ -1.6
HOXA9P31269 AC245028.2-201ENST00000458673 253 ntBASIC5.03□□□□□ -1.6
HOXA9P31269 OR9N1P-201ENST00000491296 333 ntBASIC5.03□□□□□ -1.6
HOXA9P31269 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.03□□□□□ -1.6
HOXA9P31269 TOMM20P2-201ENST00000540082 421 ntBASIC5.03□□□□□ -1.6
HOXA9P31269 DPRXP4-201ENST00000578053 568 ntBASIC5.03□□□□□ -1.6
HOXA9P31269 MIR4277-201ENST00000578298 84 ntBASIC5.03□□□□□ -1.6
HOXA9P31269 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA9P31269 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA9P31269 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA9P31269 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA9P31269 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA9P31269 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HOXA9P31269 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA9P31269 TLK1P1-201ENST00000456760 2440 ntBASIC5.03□□□□□ -1.6
HOXA9P31269 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA9P31269 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA9P31269 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA9P31269 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA9P31269 AL137100.1-201ENST00000556703 1620 ntBASIC5.02□□□□□ -1.61
HOXA9P31269 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA9P31269 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA9P31269 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXA9P31269 AC006065.1-201ENST00000422539 802 ntBASIC5.02□□□□□ -1.61
HOXA9P31269 ARL2BPP10-201ENST00000446487 531 ntBASIC5.02□□□□□ -1.61
HOXA9P31269 AL157385.1-201ENST00000446973 268 ntBASIC5.02□□□□□ -1.61
HOXA9P31269 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA9P31269 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA9P31269 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXA9P31269 AC091868.1-201ENST00000508746 304 ntBASIC5.02□□□□□ -1.61
HOXA9P31269 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA9P31269 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA9P31269 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA9P31269 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA9P31269 RPL12P25-202ENST00000598100 674 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms