Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 EIF4A2P5-201ENST00000529914 499 ntBASIC3.69□□□□□ -1.82
HLA-DMBP28068 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DMBP28068 OR7E128P-201ENST00000532736 1024 ntBASIC3.69□□□□□ -1.82
HLA-DMBP28068 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DMBP28068 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMBP28068 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
HLA-DMBP28068 MIR4436B2-201ENST00000581415 91 ntBASIC3.69□□□□□ -1.82
HLA-DMBP28068 MIR4436B1-201ENST00000583272 91 ntBASIC3.69□□□□□ -1.82
HLA-DMBP28068 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DMBP28068 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.69□□□□□ -1.82
HLA-DMBP28068 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.69□□□□□ -1.82
HLA-DMBP28068 AC133644.2-201ENST00000608142 540 ntBASIC3.69□□□□□ -1.82
HLA-DMBP28068 AC093799.2-201ENST00000610062 578 ntBASIC3.69□□□□□ -1.82
HLA-DMBP28068 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMBP28068 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMBP28068 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMBP28068 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMBP28068 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMBP28068 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMBP28068 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
HLA-DMBP28068 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMBP28068 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMBP28068 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMBP28068 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DMBP28068 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DMBP28068 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DMBP28068 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMBP28068 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMBP28068 A2MP1-204ENST00000566278 4130 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMBP28068 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMBP28068 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMBP28068 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMBP28068 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMBP28068 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMBP28068 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMBP28068 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMBP28068 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 GAPDHP15-201ENST00000398586 975 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 AL136116.2-201ENST00000404020 785 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMBP28068 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 OR7E125P-201ENST00000443450 846 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 RN7SL244P-201ENST00000493405 297 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 AC231760.1-201ENST00000498002 260 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 COX6B1P5-201ENST00000509843 249 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 RPS27AP18-201ENST00000515536 459 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 AP001922.4-201ENST00000526967 290 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 AL049839.1-201ENST00000556151 657 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 AC011270.1-201ENST00000558606 583 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 OR1F2P-201ENST00000570470 933 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 AP005119.2-201ENST00000579735 1105 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 OR7M1P-201ENST00000608946 533 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 Mico1.1-201ENST00000611698 204 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 MAPK10-263ENST00000641052 4307 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DMBP28068 VN2R3P-201ENST00000422626 1412 ntBASIC3.68□□□□□ -1.82
HLA-DMBP28068 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DMBP28068 MIPEPP2-201ENST00000422560 1819 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 AC008758.3-201ENST00000507003 1829 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DMBP28068 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
HLA-DMBP28068 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DMBP28068 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HLA-DMBP28068 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DMBP28068 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DMBP28068 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DMBP28068 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DMBP28068 RNA5SP428-201ENST00000365129 132 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 SNORA68.2-201ENST00000391263 128 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 AL139128.1-201ENST00000413921 941 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 GJA6P-201ENST00000415117 1042 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 DDX39BP1-205ENST00000422507 192 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 PSMD10P3-201ENST00000437000 448 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 AC004938.1-201ENST00000438468 308 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 AL137845.2-201ENST00000444292 988 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 SUMO2P1-206ENST00000445436 284 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 KNOP1P3-201ENST00000446933 426 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 NDUFA5P8-201ENST00000449019 346 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DMBP28068 RN7SL517P-201ENST00000462240 305 ntBASIC3.67□□□□□ -1.82
HLA-DMBP28068 AC020890.1-201ENST00000491837 504 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms