Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.39□□□□□ -1.23
RFX1P22670 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.39□□□□□ -1.23
RFX1P22670 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RFX1P22670 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.38□□□□□ -1.23
RFX1P22670 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
RFX1P22670 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RFX1P22670 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 AP002800.1-201ENST00000624982 2225 ntBASIC7.38□□□□□ -1.23
RFX1P22670 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RFX1P22670 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.38□□□□□ -1.23
RFX1P22670 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 RN7SKP171-201ENST00000364417 303 ntBASIC7.38□□□□□ -1.23
RFX1P22670 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.38□□□□□ -1.23
RFX1P22670 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RFX1P22670 RNA5SP122-201ENST00000384457 108 ntBASIC7.38□□□□□ -1.23
RFX1P22670 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RFX1P22670 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RFX1P22670 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC7.38□□□□□ -1.23
RFX1P22670 MTND4P28-201ENST00000426217 387 ntBASIC7.38□□□□□ -1.23
RFX1P22670 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.38□□□□□ -1.23
RFX1P22670 PSPHP1-201ENST00000450062 261 ntBASIC7.38□□□□□ -1.23
RFX1P22670 AL133244.1-201ENST00000456007 258 ntBASIC7.38□□□□□ -1.23
RFX1P22670 AC097493.1-201ENST00000463958 372 ntBASIC7.38□□□□□ -1.23
RFX1P22670 AC013828.1-201ENST00000481845 158 ntBASIC7.38□□□□□ -1.23
RFX1P22670 AC109462.1-201ENST00000491087 368 ntBASIC7.38□□□□□ -1.23
RFX1P22670 RPL37P23-201ENST00000492641 294 ntBASIC7.38□□□□□ -1.23
RFX1P22670 RN7SL187P-201ENST00000495587 303 ntBASIC7.38□□□□□ -1.23
RFX1P22670 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.38□□□□□ -1.23
RFX1P22670 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC7.38□□□□□ -1.23
RFX1P22670 AC087752.2-201ENST00000521219 281 ntBASIC7.38□□□□□ -1.23
RFX1P22670 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.38□□□□□ -1.23
RFX1P22670 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC7.38□□□□□ -1.23
RFX1P22670 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.38□□□□□ -1.23
RFX1P22670 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.38□□□□□ -1.23
RFX1P22670 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC7.38□□□□□ -1.23
RFX1P22670 AC104785.1-201ENST00000603220 588 ntBASIC7.38□□□□□ -1.23
RFX1P22670 AC233280.2-201ENST00000603917 1070 ntBASIC7.38□□□□□ -1.23
RFX1P22670 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 AP001521.1-201ENST00000609150 300 ntBASIC7.38□□□□□ -1.23
RFX1P22670 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.38□□□□□ -1.23
RFX1P22670 AL445647.2-201ENST00000615170 130 ntBASIC7.38□□□□□ -1.23
RFX1P22670 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.38□□□□□ -1.23
RFX1P22670 AC138649.3-201ENST00000622154 254 ntBASIC7.38□□□□□ -1.23
RFX1P22670 AC073593.1-201ENST00000624500 411 ntBASIC7.38□□□□□ -1.23
RFX1P22670 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.38□□□□□ -1.23
RFX1P22670 ZNRD1ASP-221ENST00000637794 1074 ntBASIC7.38□□□□□ -1.23
RFX1P22670 CASC19-264ENST00000641912 1184 ntBASIC7.38□□□□□ -1.23
RFX1P22670 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.38□□□□□ -1.23
RFX1P22670 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.38□□□□□ -1.23
RFX1P22670 AL596244.1-201ENST00000567068 3779 ntBASIC7.38□□□□□ -1.23
RFX1P22670 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX1P22670 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.38□□□□□ -1.23
RFX1P22670 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.38□□□□□ -1.23
RFX1P22670 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC7.37□□□□□ -1.23
RFX1P22670 AL512329.1-201ENST00000404600 1592 ntBASIC7.37□□□□□ -1.23
RFX1P22670 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.37□□□□□ -1.23
RFX1P22670 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
RFX1P22670 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.37□□□□□ -1.23
RFX1P22670 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.37□□□□□ -1.23
RFX1P22670 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
RFX1P22670 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 AP000866.6-201ENST00000638898 3579 ntBASIC7.37□□□□□ -1.23
RFX1P22670 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
RFX1P22670 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
RFX1P22670 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RFX1P22670 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.37□□□□□ -1.23
RFX1P22670 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
RFX1P22670 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
RFX1P22670 SNORA7A-201ENST00000384765 139 ntBASIC7.37□□□□□ -1.23
RFX1P22670 RNA5SP176-201ENST00000390956 110 ntBASIC7.37□□□□□ -1.23
RFX1P22670 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.37□□□□□ -1.23
RFX1P22670 AL512422.1-201ENST00000407033 553 ntBASIC7.37□□□□□ -1.23
RFX1P22670 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.37□□□□□ -1.23
RFX1P22670 THEM7P-201ENST00000419556 672 ntBASIC7.37□□□□□ -1.23
RFX1P22670 AC007394.1-201ENST00000421941 531 ntBASIC7.37□□□□□ -1.23
RFX1P22670 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms