Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ERCC3P19447 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ERCC3P19447 SNORA17A-201ENST00000391185 133 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 AL138880.1-201ENST00000405824 642 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 SNORA11B-201ENST00000408175 129 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC7.18□□□□□ -1.26
ERCC3P19447 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.18□□□□□ -1.26
ERCC3P19447 OFD1P2Y-201ENST00000421895 1149 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 MTND6P12-201ENST00000428247 522 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 RPL12P16-201ENST00000431098 498 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.18□□□□□ -1.26
ERCC3P19447 AL590103.1-201ENST00000434488 307 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 PPIAP13-201ENST00000434706 478 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 RPS25P9-201ENST00000435591 252 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 CYCSP51-201ENST00000443545 318 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC7.18□□□□□ -1.26
ERCC3P19447 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC7.18□□□□□ -1.26
ERCC3P19447 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 AC007998.1-201ENST00000474156 672 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 RN7SL174P-201ENST00000475578 289 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 AC072039.1-201ENST00000477611 581 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC7.18□□□□□ -1.26
ERCC3P19447 RPS6P4-201ENST00000494693 758 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
ERCC3P19447 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.18□□□□□ -1.26
ERCC3P19447 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC7.18□□□□□ -1.26
ERCC3P19447 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC7.18□□□□□ -1.26
ERCC3P19447 Y_RNA.667-201ENST00000516212 107 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.18□□□□□ -1.26
ERCC3P19447 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.18□□□□□ -1.26
ERCC3P19447 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 RPA2P1-201ENST00000556557 721 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.18□□□□□ -1.26
ERCC3P19447 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
ERCC3P19447 AP000811.1-201ENST00000603803 651 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 AC091488.1-201ENST00000604239 660 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 AL591167.1-201ENST00000607321 456 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 MIR6886-201ENST00000619864 61 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ERCC3P19447 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.18□□□□□ -1.26
ERCC3P19447 SNORA17.5-201ENST00000630429 132 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.18□□□□□ -1.26
ERCC3P19447 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ERCC3P19447 AC005332.9-201ENST00000620266 2921 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.18□□□□□ -1.26
ERCC3P19447 AC015689.2-201ENST00000528172 1738 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
ERCC3P19447 AL355488.2-201ENST00000609909 2850 ntBASIC7.18□□□□□ -1.26
ERCC3P19447 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ERCC3P19447 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.17□□□□□ -1.26
ERCC3P19447 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.17□□□□□ -1.26
ERCC3P19447 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC096921.2-201ENST00000561507 1916 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 AL391994.1-201ENST00000254724 282 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
ERCC3P19447 RNU6-582P-201ENST00000362989 107 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 RNU1-49P-201ENST00000363468 159 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 SNORA4.1-201ENST00000364263 144 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.17□□□□□ -1.26
ERCC3P19447 MT-TH-201ENST00000387441 69 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC012519.1-201ENST00000424588 610 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 PPIAP10-201ENST00000438675 458 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.17□□□□□ -1.26
ERCC3P19447 RPL31P15-201ENST00000449770 338 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 CFL1P4-201ENST00000451536 498 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 RPL37P3-201ENST00000456825 293 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC7.17□□□□□ -1.26
ERCC3P19447 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
ERCC3P19447 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC005178.1-201ENST00000508392 440 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 ATP1B1P1-201ENST00000509767 915 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 AC010343.2-201ENST00000510162 224 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC090958.1-201ENST00000511122 351 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 RNA5SP438-201ENST00000516561 112 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.17□□□□□ -1.26
ERCC3P19447 AP003396.4-201ENST00000527574 265 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 AP001858.2-201ENST00000536213 601 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
ERCC3P19447 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC004217.3-201ENST00000551552 878 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms