Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC231759.1-201ENST00000616455 597 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 MIR6133-201ENST00000617057 108 ntBASIC6.12□□□□□ -1.43
HLA-DOAP06340 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HLA-DOAP06340 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DOAP06340 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 AL669831.5-218ENST00000591702 1873 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DOAP06340 TCP1P3-201ENST00000414406 1498 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DOAP06340 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DOAP06340 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DOAP06340 MIR365B-201ENST00000362317 111 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 SNORA70.6-201ENST00000383934 134 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 RAB9AP4-201ENST00000415230 609 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 LUZP4P1-201ENST00000415420 344 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 AL158827.1-201ENST00000416300 391 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 AC104837.2-201ENST00000427236 424 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 TXNL1P1-201ENST00000429528 554 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 MED6P1-201ENST00000439659 713 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 AC023271.1-201ENST00000445936 1090 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 NOP56P2-201ENST00000447491 769 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 SNORD11.1-201ENST00000459482 85 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 AC022336.1-201ENST00000475510 337 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 NPM1P29-201ENST00000483112 803 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 RPS12P31-201ENST00000491419 398 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 RN7SL244P-201ENST00000493405 297 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 RNU6-276P-201ENST00000516114 96 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 AC091163.3-201ENST00000518269 1144 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 AC010376.1-201ENST00000522101 334 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 MTCO1P47-201ENST00000523889 1271 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 OR7E128P-201ENST00000532736 1024 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DOAP06340 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 MIR4691-201ENST00000583764 85 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 AC011626.1-201ENST00000604710 562 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 FAM25E-202ENST00000608562 189 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 AL096803.3-201ENST00000609032 532 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 AL627230.1-201ENST00000613077 211 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 AL591926.8-201ENST00000616876 211 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DOAP06340 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 AL137058.3-201ENST00000624531 3099 ntBASIC6.11□□□□□ -1.43
HLA-DOAP06340 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DOAP06340 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HLA-DOAP06340 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.11□□□□□ -1.43
HLA-DOAP06340 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AC120338.1-201ENST00000625074 1541 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AL355578.1-201ENST00000607405 1328 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AL137918.1-201ENST00000624542 1922 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 SNORA66-201ENST00000384792 133 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 Z86062.1-201ENST00000406773 777 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 BX664727.1-201ENST00000416024 466 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 AL158050.1-201ENST00000416077 457 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 AC241520.1-201ENST00000422654 1099 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AC016772.1-201ENST00000444170 1261 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 RPL21P18-201ENST00000469899 480 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 AC105918.1-201ENST00000474399 838 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms