Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SNORD96B-201ENST00000386148 79 ntBASIC4.67□□□□□ -1.66
HLA-DQB2P05538 AL049697.2-201ENST00000403708 294 ntBASIC4.67□□□□□ -1.66
HLA-DQB2P05538 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 RBMY2KP-201ENST00000418221 992 ntBASIC4.67□□□□□ -1.66
HLA-DQB2P05538 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 AL359265.2-201ENST00000434367 631 ntBASIC4.67□□□□□ -1.66
HLA-DQB2P05538 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 CEACAMP6-201ENST00000452007 574 ntBASIC4.67□□□□□ -1.66
HLA-DQB2P05538 GOLGA5P1-201ENST00000507317 980 ntBASIC4.67□□□□□ -1.66
HLA-DQB2P05538 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 BNIP3P41-202ENST00000616656 861 ntBASIC4.67□□□□□ -1.66
HLA-DQB2P05538 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AC108467.2-201ENST00000617640 1597 ntBASIC4.66□□□□□ -1.66
HLA-DQB2P05538 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 SNORA71.2-201ENST00000364941 134 ntBASIC4.66□□□□□ -1.66
HLA-DQB2P05538 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 MIR921-201ENST00000401133 56 ntBASIC4.66□□□□□ -1.66
HLA-DQB2P05538 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AL139128.1-201ENST00000413921 941 ntBASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AC010326.1-201ENST00000462726 602 ntBASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 SUMO2P4-201ENST00000504193 276 ntBASIC4.66□□□□□ -1.66
HLA-DQB2P05538 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AL133338.2-201ENST00000604292 736 ntBASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AL161616.1-201ENST00000611867 286 ntBASIC4.66□□□□□ -1.66
HLA-DQB2P05538 MIR6730-201ENST00000622213 67 ntBASIC4.66□□□□□ -1.66
HLA-DQB2P05538 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AC073869.7-201ENST00000640874 297 ntBASIC4.66□□□□□ -1.66
HLA-DQB2P05538 AC093849.1-201ENST00000563631 2209 ntBASIC4.66□□□□□ -1.66
HLA-DQB2P05538 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HLA-DQB2P05538 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQB2P05538 OR14L1P-202ENST00000641545 3009 ntBASIC4.65□□□□□ -1.66
HLA-DQB2P05538 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQB2P05538 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQB2P05538 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQB2P05538 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQB2P05538 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.65□□□□□ -1.66
HLA-DQB2P05538 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQB2P05538 AC103591.2-201ENST00000265259 766 ntBASIC4.65□□□□□ -1.67
HLA-DQB2P05538 MIR659-201ENST00000384963 97 ntBASIC4.65□□□□□ -1.67
HLA-DQB2P05538 EI24P3-201ENST00000399046 1062 ntBASIC4.65□□□□□ -1.67
HLA-DQB2P05538 AC019050.1-201ENST00000418508 492 ntBASIC4.65□□□□□ -1.67
HLA-DQB2P05538 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 YWHAZP2-201ENST00000440317 728 ntBASIC4.65□□□□□ -1.67
HLA-DQB2P05538 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 RN7SL354P-201ENST00000469282 294 ntBASIC4.65□□□□□ -1.67
HLA-DQB2P05538 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.65□□□□□ -1.67
HLA-DQB2P05538 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 RNA5SP446-201ENST00000515955 82 ntBASIC4.65□□□□□ -1.67
HLA-DQB2P05538 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 AC097505.1-201ENST00000610199 565 ntBASIC4.65□□□□□ -1.67
HLA-DQB2P05538 MIR7703-201ENST00000620784 77 ntBASIC4.65□□□□□ -1.67
HLA-DQB2P05538 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQB2P05538 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQB2P05538 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms