Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
P04436 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
P04436 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
P04436 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
P04436 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 AC068446.1-201ENST00000556425 1549 ntBASIC4.47□□□□□ -1.69
P04436 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.47□□□□□ -1.69
P04436 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 AC005332.5-201ENST00000591222 2919 ntBASIC4.47□□□□□ -1.69
P04436 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.47□□□□□ -1.69
P04436 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.47□□□□□ -1.69
P04436 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
P04436 AC017079.1-201ENST00000333650 415 ntBASIC4.47□□□□□ -1.69
P04436 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 RNA5SP87-201ENST00000384155 118 ntBASIC4.47□□□□□ -1.69
P04436 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
P04436 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 RNA5SP113-201ENST00000410486 84 ntBASIC4.47□□□□□ -1.69
P04436 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.47□□□□□ -1.69
P04436 QRSL1P2-201ENST00000418582 964 ntBASIC4.47□□□□□ -1.69
P04436 HMGN2P27-201ENST00000427352 270 ntBASIC4.47□□□□□ -1.69
P04436 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.47□□□□□ -1.69
P04436 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.47□□□□□ -1.69
P04436 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.47□□□□□ -1.69
P04436 AC073052.1-201ENST00000440417 714 ntBASIC4.47□□□□□ -1.69
P04436 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.47□□□□□ -1.69
P04436 MRPL35P2-201ENST00000448009 511 ntBASIC4.47□□□□□ -1.69
P04436 CCRL1P1-201ENST00000449542 1053 ntBASIC4.47□□□□□ -1.69
P04436 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.47□□□□□ -1.69
P04436 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.47□□□□□ -1.69
P04436 AURKAPS2-201ENST00000454983 333 ntBASIC4.47□□□□□ -1.69
P04436 RPL23AP56-201ENST00000460778 453 ntBASIC4.47□□□□□ -1.69
P04436 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.47□□□□□ -1.69
P04436 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.47□□□□□ -1.69
P04436 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.47□□□□□ -1.69
P04436 AC117525.1-201ENST00000515228 503 ntBASIC4.47□□□□□ -1.69
P04436 AC116553.2-201ENST00000564203 463 ntBASIC4.47□□□□□ -1.69
P04436 AC027281.1-201ENST00000574178 758 ntBASIC4.47□□□□□ -1.69
P04436 AC091042.1-201ENST00000579213 173 ntBASIC4.47□□□□□ -1.69
P04436 SNORA74C-1-201ENST00000580726 201 ntBASIC4.47□□□□□ -1.69
P04436 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.47□□□□□ -1.69
P04436 SNX6P1-201ENST00000601728 1224 ntBASIC4.47□□□□□ -1.69
P04436 AC104785.1-201ENST00000603220 588 ntBASIC4.47□□□□□ -1.69
P04436 AC104687.2-201ENST00000604442 342 ntBASIC4.47□□□□□ -1.69
P04436 AC021106.3-201ENST00000623925 531 ntBASIC4.47□□□□□ -1.69
P04436 AP000648.2-201ENST00000624182 404 ntBASIC4.47□□□□□ -1.69
P04436 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.47□□□□□ -1.69
P04436 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.47□□□□□ -1.69
P04436 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
P04436 UGT2B26P-201ENST00000508672 1613 ntBASIC4.46□□□□□ -1.69
P04436 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.46□□□□□ -1.69
P04436 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
P04436 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
P04436 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.46□□□□□ -1.7
P04436 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.46□□□□□ -1.7
P04436 AC011447.7-201ENST00000624228 1590 ntBASIC4.46□□□□□ -1.7
P04436 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
P04436 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
P04436 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
P04436 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
P04436 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
P04436 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
P04436 AL357515.1-201ENST00000402967 542 ntBASIC4.46□□□□□ -1.7
P04436 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.46□□□□□ -1.7
P04436 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.46□□□□□ -1.7
P04436 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.46□□□□□ -1.7
P04436 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.46□□□□□ -1.7
P04436 AC069277.2-201ENST00000454211 432 ntBASIC4.46□□□□□ -1.7
P04436 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.46□□□□□ -1.7
P04436 AC147055.1-201ENST00000509261 750 ntBASIC4.46□□□□□ -1.7
P04436 AC105031.1-201ENST00000518550 476 ntBASIC4.46□□□□□ -1.7
P04436 AL359219.2-201ENST00000555184 348 ntBASIC4.46□□□□□ -1.7
P04436 AL049874.4-201ENST00000557593 255 ntBASIC4.46□□□□□ -1.7
P04436 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.46□□□□□ -1.7
P04436 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.46□□□□□ -1.7
P04436 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.46□□□□□ -1.7
P04436 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.46□□□□□ -1.7
P04436 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.46□□□□□ -1.7
P04436 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.46□□□□□ -1.7
P04436 AC087283.1-201ENST00000604029 1074 ntBASIC4.46□□□□□ -1.7
P04436 AL391358.1-201ENST00000605342 190 ntBASIC4.46□□□□□ -1.7
P04436 AC010424.2-201ENST00000607594 443 ntBASIC4.46□□□□□ -1.7
P04436 AL136295.6-201ENST00000610486 658 ntBASIC4.46□□□□□ -1.7
P04436 FAM27B-201ENST00000610601 213 ntBASIC4.46□□□□□ -1.7
P04436 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.46□□□□□ -1.7
P04436 AL356274.1-201ENST00000617064 410 ntBASIC4.46□□□□□ -1.7
P04436 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.46□□□□□ -1.7
P04436 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
P04436 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms