Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR4480-201ENST00000582492 71 ntBASIC5.03□□□□□ -1.6
APOEP02649 MIR4737-201ENST00000583979 81 ntBASIC5.03□□□□□ -1.6
APOEP02649 AL512782.1-201ENST00000603093 364 ntBASIC5.03□□□□□ -1.6
APOEP02649 AL121932.1-201ENST00000605542 214 ntBASIC5.03□□□□□ -1.6
APOEP02649 AC100827.5-201ENST00000615883 426 ntBASIC5.03□□□□□ -1.6
APOEP02649 MIR8069-1-201ENST00000616627 86 ntBASIC5.03□□□□□ -1.6
APOEP02649 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.03□□□□□ -1.6
APOEP02649 AC022106.2-201ENST00000620114 757 ntBASIC5.03□□□□□ -1.6
APOEP02649 MIR8069-2-201ENST00000621412 86 ntBASIC5.03□□□□□ -1.6
APOEP02649 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
APOEP02649 AC015813.6-201ENST00000624409 5808 ntBASIC5.03□□□□□ -1.6
APOEP02649 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.03□□□□□ -1.6
APOEP02649 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.03□□□□□ -1.6
APOEP02649 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
APOEP02649 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOEP02649 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOEP02649 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.02□□□□□ -1.61
APOEP02649 NCLP2-201ENST00000416078 1462 ntBASIC5.02□□□□□ -1.61
APOEP02649 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOEP02649 MIR937-201ENST00000401271 86 ntBASIC5.02□□□□□ -1.61
APOEP02649 CKS1BP6-201ENST00000424932 240 ntBASIC5.02□□□□□ -1.61
APOEP02649 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.02□□□□□ -1.61
APOEP02649 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
APOEP02649 AL360081.1-201ENST00000428299 555 ntBASIC5.02□□□□□ -1.61
APOEP02649 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.02□□□□□ -1.61
APOEP02649 RPS26P4-201ENST00000431743 355 ntBASIC5.02□□□□□ -1.61
APOEP02649 AC020890.1-201ENST00000491837 504 ntBASIC5.02□□□□□ -1.61
APOEP02649 RN7SL558P-201ENST00000497468 299 ntBASIC5.02□□□□□ -1.61
APOEP02649 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.02□□□□□ -1.61
APOEP02649 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.02□□□□□ -1.61
APOEP02649 RNA5SP392-201ENST00000516905 112 ntBASIC5.02□□□□□ -1.61
APOEP02649 RNU6-709P-201ENST00000517257 104 ntBASIC5.02□□□□□ -1.61
APOEP02649 BUD31P1-201ENST00000521828 359 ntBASIC5.02□□□□□ -1.61
APOEP02649 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.02□□□□□ -1.61
APOEP02649 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.02□□□□□ -1.61
APOEP02649 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.02□□□□□ -1.61
APOEP02649 AC133555.2-201ENST00000550213 292 ntBASIC5.02□□□□□ -1.61
APOEP02649 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
APOEP02649 AC133552.5-201ENST00000604266 540 ntBASIC5.02□□□□□ -1.61
APOEP02649 AC007497.1-201ENST00000610421 561 ntBASIC5.02□□□□□ -1.61
APOEP02649 FAM27B-201ENST00000610601 213 ntBASIC5.02□□□□□ -1.61
APOEP02649 AL022401.1-201ENST00000619498 108 ntBASIC5.02□□□□□ -1.61
APOEP02649 AC006840.1-201ENST00000623069 542 ntBASIC5.02□□□□□ -1.61
APOEP02649 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.02□□□□□ -1.61
APOEP02649 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
APOEP02649 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOEP02649 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOEP02649 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOEP02649 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOEP02649 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOEP02649 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.02□□□□□ -1.61
APOEP02649 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.02□□□□□ -1.61
APOEP02649 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
APOEP02649 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.01□□□□□ -1.61
APOEP02649 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
APOEP02649 AC126323.6-202ENST00000568092 3511 ntBASIC5.01□□□□□ -1.61
APOEP02649 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
APOEP02649 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
APOEP02649 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
APOEP02649 AC073429.2-201ENST00000569694 1444 ntBASIC5.01□□□□□ -1.61
APOEP02649 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
APOEP02649 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
APOEP02649 AL672167.2-201ENST00000377164 879 ntBASIC5.01□□□□□ -1.61
APOEP02649 RNA5SP87-201ENST00000384155 118 ntBASIC5.01□□□□□ -1.61
APOEP02649 U3.30-201ENST00000391308 210 ntBASIC5.01□□□□□ -1.61
APOEP02649 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.01□□□□□ -1.61
APOEP02649 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.01□□□□□ -1.61
APOEP02649 RPS17P8-201ENST00000434525 335 ntBASIC5.01□□□□□ -1.61
APOEP02649 AL451139.1-201ENST00000434718 346 ntBASIC5.01□□□□□ -1.61
APOEP02649 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.01□□□□□ -1.61
APOEP02649 RHEBP2-201ENST00000450289 600 ntBASIC5.01□□□□□ -1.61
APOEP02649 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.01□□□□□ -1.61
APOEP02649 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.01□□□□□ -1.61
APOEP02649 RPS5P7-201ENST00000456664 608 ntBASIC5.01□□□□□ -1.61
APOEP02649 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.01□□□□□ -1.61
APOEP02649 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.01□□□□□ -1.61
APOEP02649 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.01□□□□□ -1.61
APOEP02649 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.01□□□□□ -1.61
APOEP02649 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.01□□□□□ -1.61
APOEP02649 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.01□□□□□ -1.61
APOEP02649 AP001880.2-201ENST00000538233 448 ntBASIC5.01□□□□□ -1.61
APOEP02649 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.01□□□□□ -1.61
APOEP02649 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.01□□□□□ -1.61
APOEP02649 AL358913.1-201ENST00000554342 121 ntBASIC5.01□□□□□ -1.61
APOEP02649 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.01□□□□□ -1.61
APOEP02649 UBE2FP2-201ENST00000566646 462 ntBASIC5.01□□□□□ -1.61
APOEP02649 AC091042.1-201ENST00000579213 173 ntBASIC5.01□□□□□ -1.61
APOEP02649 AC022726.1-201ENST00000587475 207 ntBASIC5.01□□□□□ -1.61
APOEP02649 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.01□□□□□ -1.61
APOEP02649 AL133406.3-201ENST00000606817 541 ntBASIC5.01□□□□□ -1.61
APOEP02649 AC004948.1-201ENST00000609858 672 ntBASIC5.01□□□□□ -1.61
APOEP02649 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
APOEP02649 AL121890.2-201ENST00000617644 465 ntBASIC5.01□□□□□ -1.61
APOEP02649 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.01□□□□□ -1.61
APOEP02649 AC139713.2-215ENST00000641428 5037 ntBASIC5.01□□□□□ -1.61
APOEP02649 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
APOEP02649 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
APOEP02649 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
APOEP02649 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
APOEP02649 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms