Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UPK1BO75841 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
UPK1BO75841 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
UPK1BO75841 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1BO75841 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
UPK1BO75841 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.04□□□□□ -1.76
UPK1BO75841 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1BO75841 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1BO75841 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1BO75841 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1BO75841 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
UPK1BO75841 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
UPK1BO75841 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1BO75841 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.04□□□□□ -1.76
UPK1BO75841 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.04□□□□□ -1.76
UPK1BO75841 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
UPK1BO75841 COX6B1P3-201ENST00000312310 260 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 RN7SKP269-201ENST00000365545 319 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.04□□□□□ -1.76
UPK1BO75841 AL136131.1-201ENST00000406079 803 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.04□□□□□ -1.76
UPK1BO75841 AC092647.1-201ENST00000420654 287 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 RCC2P2-201ENST00000422174 918 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AC108075.1-201ENST00000424692 529 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 RPL23AP25-201ENST00000430973 463 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 RPL7P28-201ENST00000437739 740 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.04□□□□□ -1.76
UPK1BO75841 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.04□□□□□ -1.76
UPK1BO75841 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.04□□□□□ -1.76
UPK1BO75841 SEPT7P6-201ENST00000469999 1143 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.04□□□□□ -1.76
UPK1BO75841 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 RPS4XP20-201ENST00000505751 772 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AL592156.1-201ENST00000508758 304 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
UPK1BO75841 RNU6-941P-201ENST00000516346 108 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AC109635.6-201ENST00000525487 1113 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AC107918.3-201ENST00000533272 382 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.04□□□□□ -1.76
UPK1BO75841 CYCSP38-201ENST00000559840 322 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 TVP23CP2-201ENST00000571473 623 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 MRPL45P2-203ENST00000573318 473 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.04□□□□□ -1.76
UPK1BO75841 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.04□□□□□ -1.76
UPK1BO75841 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.04□□□□□ -1.76
UPK1BO75841 AL499605.1-201ENST00000604628 403 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.04□□□□□ -1.76
UPK1BO75841 AC010424.2-201ENST00000607594 443 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.04□□□□□ -1.76
UPK1BO75841 AC015922.4-201ENST00000612568 690 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AP001005.3-201ENST00000622049 129 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AC015722.2-201ENST00000622210 551 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.04□□□□□ -1.76
UPK1BO75841 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.04□□□□□ -1.76
UPK1BO75841 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 MIR193BHG-214ENST00000641765 509 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UPK1BO75841 AC093775.1-201ENST00000624154 1868 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 FAM35DP-201ENST00000323387 2712 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 DDX18P3-201ENST00000404856 2007 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AL356317.1-201ENST00000396110 1436 ntBASIC4.04□□□□□ -1.76
UPK1BO75841 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK1BO75841 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
UPK1BO75841 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1BO75841 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1BO75841 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1BO75841 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1BO75841 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK1BO75841 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1BO75841 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1BO75841 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1BO75841 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1BO75841 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1BO75841 RNA5SP388-201ENST00000362584 119 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 RNA5SP339-201ENST00000390987 122 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 AL589647.1-201ENST00000402485 466 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1BO75841 RPS23P10-201ENST00000416185 486 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 AC073136.2-201ENST00000417282 849 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK1BO75841 RPL7P4-203ENST00000430239 730 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK1BO75841 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK1BO75841 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1BO75841 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1BO75841 AC007383.1-201ENST00000445875 636 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPK1BO75841 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK1BO75841 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK1BO75841 AC011476.1-201ENST00000466725 307 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 RN7SL51P-201ENST00000468230 285 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 LSM3P4-201ENST00000502948 309 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK1BO75841 CCNHP1-201ENST00000513311 678 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 AC134349.2-201ENST00000535136 910 ntBASIC4.03□□□□□ -1.76
UPK1BO75841 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.03□□□□□ -1.76
UPK1BO75841 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.03□□□□□ -1.76
UPK1BO75841 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms