Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.4□□□□□ -1.54
MSI1O43347 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.4□□□□□ -1.54
MSI1O43347 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MSI1O43347 RN7SKP153-201ENST00000365026 316 ntBASIC5.4□□□□□ -1.54
MSI1O43347 OR13C3-201ENST00000374781 1108 ntBASIC5.4□□□□□ -1.54
MSI1O43347 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.4□□□□□ -1.54
MSI1O43347 RNU6-31P-201ENST00000384388 108 ntBASIC5.4□□□□□ -1.54
MSI1O43347 OR8V1P-201ENST00000395193 873 ntBASIC5.4□□□□□ -1.54
MSI1O43347 NPM1P38-201ENST00000403835 865 ntBASIC5.4□□□□□ -1.54
MSI1O43347 MIR1182-201ENST00000408363 97 ntBASIC5.4□□□□□ -1.54
MSI1O43347 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.4□□□□□ -1.54
MSI1O43347 RPS3AP25-201ENST00000411660 793 ntBASIC5.4□□□□□ -1.54
MSI1O43347 RPL23AP27-201ENST00000415161 451 ntBASIC5.4□□□□□ -1.54
MSI1O43347 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.4□□□□□ -1.54
MSI1O43347 OR51A6P-201ENST00000418680 1004 ntBASIC5.4□□□□□ -1.54
MSI1O43347 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.4□□□□□ -1.54
MSI1O43347 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.4□□□□□ -1.54
MSI1O43347 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.4□□□□□ -1.54
MSI1O43347 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.4□□□□□ -1.54
MSI1O43347 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.4□□□□□ -1.54
MSI1O43347 DUXAP8-207ENST00000456786 622 ntBASIC5.4□□□□□ -1.54
MSI1O43347 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.4□□□□□ -1.54
MSI1O43347 AC108043.1-201ENST00000512696 574 ntBASIC5.4□□□□□ -1.54
MSI1O43347 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MSI1O43347 AC010476.1-201ENST00000519111 851 ntBASIC5.4□□□□□ -1.54
MSI1O43347 AC022360.1-201ENST00000521058 340 ntBASIC5.4□□□□□ -1.54
MSI1O43347 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.4□□□□□ -1.54
MSI1O43347 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.4□□□□□ -1.54
MSI1O43347 OR7E13P-201ENST00000526052 910 ntBASIC5.4□□□□□ -1.54
MSI1O43347 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.4□□□□□ -1.54
MSI1O43347 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.4□□□□□ -1.54
MSI1O43347 AC068993.1-201ENST00000546724 589 ntBASIC5.4□□□□□ -1.54
MSI1O43347 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.4□□□□□ -1.54
MSI1O43347 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.4□□□□□ -1.54
MSI1O43347 AC104229.1-201ENST00000561364 255 ntBASIC5.4□□□□□ -1.54
MSI1O43347 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.4□□□□□ -1.54
MSI1O43347 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.4□□□□□ -1.54
MSI1O43347 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.4□□□□□ -1.54
MSI1O43347 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.4□□□□□ -1.54
MSI1O43347 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.4□□□□□ -1.54
MSI1O43347 MTCO2P22-201ENST00000603246 681 ntBASIC5.4□□□□□ -1.54
MSI1O43347 AC112220.2-201ENST00000605513 533 ntBASIC5.4□□□□□ -1.54
MSI1O43347 DUXAP10-204ENST00000612052 616 ntBASIC5.4□□□□□ -1.54
MSI1O43347 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.4□□□□□ -1.54
MSI1O43347 MIR6839-201ENST00000620425 113 ntBASIC5.4□□□□□ -1.54
MSI1O43347 AC099494.2-201ENST00000623371 978 ntBASIC5.4□□□□□ -1.54
MSI1O43347 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.4□□□□□ -1.54
MSI1O43347 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.4□□□□□ -1.54
MSI1O43347 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
MSI1O43347 AC135068.12-201ENST00000637370 931 ntBASIC5.4□□□□□ -1.54
MSI1O43347 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
MSI1O43347 LINC01739-205ENST00000641890 573 ntBASIC5.4□□□□□ -1.54
MSI1O43347 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
MSI1O43347 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MSI1O43347 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MSI1O43347 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSI1O43347 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSI1O43347 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSI1O43347 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.39□□□□□ -1.55
MSI1O43347 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
MSI1O43347 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
MSI1O43347 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.39□□□□□ -1.55
MSI1O43347 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.39□□□□□ -1.55
MSI1O43347 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MSI1O43347 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSI1O43347 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.39□□□□□ -1.55
MSI1O43347 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSI1O43347 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MSI1O43347 RNU6-481P-201ENST00000384194 107 ntBASIC5.39□□□□□ -1.55
MSI1O43347 RNA5SP241-201ENST00000391326 114 ntBASIC5.39□□□□□ -1.55
MSI1O43347 RN7SKP213-201ENST00000410746 298 ntBASIC5.39□□□□□ -1.55
MSI1O43347 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.39□□□□□ -1.55
MSI1O43347 TATDN1P1-201ENST00000414123 891 ntBASIC5.39□□□□□ -1.55
MSI1O43347 AL160175.1-201ENST00000428124 247 ntBASIC5.39□□□□□ -1.55
MSI1O43347 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.39□□□□□ -1.55
MSI1O43347 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.39□□□□□ -1.55
MSI1O43347 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.39□□□□□ -1.55
MSI1O43347 TPTE2P3-201ENST00000441562 1189 ntBASIC5.39□□□□□ -1.55
MSI1O43347 AL353898.1-201ENST00000444055 238 ntBASIC5.39□□□□□ -1.55
MSI1O43347 AC016772.1-201ENST00000444170 1261 ntBASIC5.39□□□□□ -1.55
MSI1O43347 AP000797.2-201ENST00000475768 606 ntBASIC5.39□□□□□ -1.55
MSI1O43347 AC020779.1-201ENST00000478757 796 ntBASIC5.39□□□□□ -1.55
MSI1O43347 RPS3AP6-201ENST00000484430 795 ntBASIC5.39□□□□□ -1.55
MSI1O43347 AC093270.2-201ENST00000486157 792 ntBASIC5.39□□□□□ -1.55
MSI1O43347 RPS23P1-201ENST00000491662 432 ntBASIC5.39□□□□□ -1.55
MSI1O43347 RPS24P16-201ENST00000497294 392 ntBASIC5.39□□□□□ -1.55
MSI1O43347 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.39□□□□□ -1.55
MSI1O43347 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.39□□□□□ -1.55
MSI1O43347 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MSI1O43347 AC021451.1-201ENST00000523498 1129 ntBASIC5.39□□□□□ -1.55
MSI1O43347 AP001804.2-201ENST00000533932 910 ntBASIC5.39□□□□□ -1.55
MSI1O43347 HMGN2P6-201ENST00000551091 273 ntBASIC5.39□□□□□ -1.55
MSI1O43347 AC021483.2-201ENST00000567415 758 ntBASIC5.39□□□□□ -1.55
MSI1O43347 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.39□□□□□ -1.55
MSI1O43347 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.39□□□□□ -1.55
MSI1O43347 AC124016.2-201ENST00000610058 665 ntBASIC5.39□□□□□ -1.55
MSI1O43347 AL512427.1-201ENST00000618593 349 ntBASIC5.39□□□□□ -1.55
MSI1O43347 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
MSI1O43347 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MSI1O43347 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms