Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC8.15□□□□□ -1.1
CUX2O14529 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC8.15□□□□□ -1.1
CUX2O14529 AC108359.1-201ENST00000616451 1211 ntBASIC8.15□□□□□ -1.1
CUX2O14529 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC8.15□□□□□ -1.1
CUX2O14529 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC8.15□□□□□ -1.1
CUX2O14529 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUX2O14529 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC8.15□□□□□ -1.1
CUX2O14529 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUX2O14529 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUX2O14529 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CUX2O14529 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC8.15□□□□□ -1.11
CUX2O14529 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CUX2O14529 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC8.15□□□□□ -1.11
CUX2O14529 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CUX2O14529 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUX2O14529 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CUX2O14529 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUX2O14529 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC8.14□□□□□ -1.11
CUX2O14529 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC8.14□□□□□ -1.11
CUX2O14529 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUX2O14529 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC8.14□□□□□ -1.11
CUX2O14529 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CUX2O14529 U3.32-201ENST00000408116 212 ntBASIC8.14□□□□□ -1.11
CUX2O14529 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.14□□□□□ -1.11
CUX2O14529 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC8.14□□□□□ -1.11
CUX2O14529 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUX2O14529 AP000619.3-201ENST00000535634 1127 ntBASIC8.14□□□□□ -1.11
CUX2O14529 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC8.14□□□□□ -1.11
CUX2O14529 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUX2O14529 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CUX2O14529 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC8.14□□□□□ -1.11
CUX2O14529 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUX2O14529 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUX2O14529 AL137141.1-201ENST00000624622 4836 ntBASIC8.14□□□□□ -1.11
CUX2O14529 RN7SKP267-201ENST00000410381 285 ntBASIC8.13□□□□□ -1.11
CUX2O14529 GOT2P5-201ENST00000433995 546 ntBASIC8.13□□□□□ -1.11
CUX2O14529 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC8.13□□□□□ -1.11
CUX2O14529 SCAND3P1-201ENST00000439854 1060 ntBASIC8.13□□□□□ -1.11
CUX2O14529 AL450023.3-201ENST00000440592 271 ntBASIC8.13□□□□□ -1.11
CUX2O14529 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUX2O14529 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC8.13□□□□□ -1.11
CUX2O14529 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUX2O14529 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC8.13□□□□□ -1.11
CUX2O14529 RNU1-6P-201ENST00000516290 144 ntBASIC8.13□□□□□ -1.11
CUX2O14529 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC8.13□□□□□ -1.11
CUX2O14529 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC8.13□□□□□ -1.11
CUX2O14529 CR392039.5-201ENST00000623201 510 ntBASIC8.13□□□□□ -1.11
CUX2O14529 LGI1-209ENST00000627699 664 ntTSL 3 BASIC8.13□□□□□ -1.11
CUX2O14529 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CUX2O14529 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUX2O14529 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CUX2O14529 AL591135.1-201ENST00000401578 5914 ntBASIC8.13□□□□□ -1.11
CUX2O14529 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUX2O14529 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUX2O14529 SMG1P6-201ENST00000532337 2930 ntBASIC8.13□□□□□ -1.11
CUX2O14529 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUX2O14529 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CUX2O14529 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUX2O14529 COX6CP15-201ENST00000426313 211 ntBASIC8.13□□□□□ -1.11
CUX2O14529 RPL7P2-201ENST00000427639 268 ntBASIC8.13□□□□□ -1.11
CUX2O14529 TCEA1P3-201ENST00000443005 880 ntBASIC8.13□□□□□ -1.11
CUX2O14529 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC8.13□□□□□ -1.11
CUX2O14529 RN7SL197P-201ENST00000466981 299 ntBASIC8.13□□□□□ -1.11
CUX2O14529 RPL36AP41-201ENST00000493820 306 ntBASIC8.13□□□□□ -1.11
CUX2O14529 SNORA70.24-201ENST00000517233 118 ntBASIC8.13□□□□□ -1.11
CUX2O14529 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC8.13□□□□□ -1.11
CUX2O14529 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC8.13□□□□□ -1.11
CUX2O14529 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC8.13□□□□□ -1.11
CUX2O14529 AC040958.1-201ENST00000561102 201 ntBASIC8.13□□□□□ -1.11
CUX2O14529 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUX2O14529 AL138721.1-201ENST00000616756 179 ntBASIC8.13□□□□□ -1.11
CUX2O14529 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUX2O14529 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUX2O14529 MAPK10-372ENST00000641954 3413 ntBASIC8.12□□□□□ -1.11
CUX2O14529 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CUX2O14529 AC073346.2-201ENST00000624724 2058 ntBASIC8.12□□□□□ -1.11
CUX2O14529 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CUX2O14529 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CUX2O14529 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
CUX2O14529 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUX2O14529 SNORA71.2-201ENST00000364941 134 ntBASIC8.12□□□□□ -1.11
CUX2O14529 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUX2O14529 SNORA70.6-201ENST00000383934 134 ntBASIC8.12□□□□□ -1.11
CUX2O14529 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC8.12□□□□□ -1.11
CUX2O14529 AC046176.1-201ENST00000435260 1170 ntBASIC8.12□□□□□ -1.11
CUX2O14529 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC8.12□□□□□ -1.11
CUX2O14529 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC8.12□□□□□ -1.11
CUX2O14529 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CUX2O14529 AC091868.1-201ENST00000508746 304 ntBASIC8.12□□□□□ -1.11
CUX2O14529 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC8.12□□□□□ -1.11
CUX2O14529 AC027369.5-201ENST00000533838 755 ntBASIC8.12□□□□□ -1.11
CUX2O14529 AL049839.1-201ENST00000556151 657 ntBASIC8.12□□□□□ -1.11
CUX2O14529 AC010547.7-201ENST00000570323 333 ntBASIC8.12□□□□□ -1.11
CUX2O14529 MIR4513-201ENST00000581077 86 ntBASIC8.12□□□□□ -1.11
CUX2O14529 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUX2O14529 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUX2O14529 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
CUX2O14529 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUX2O14529 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUX2O14529 ZNF137P-201ENST00000456718 1920 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms