Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM38O00635 MIR8080-201ENST00000622224 89 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC006840.1-201ENST00000623069 542 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 CASC19-264ENST00000641912 1184 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM38O00635 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRIM38O00635 DDX18P4-201ENST00000511690 1966 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
TRIM38O00635 PABPC1P6-201ENST00000445594 1829 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM38O00635 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM38O00635 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM38O00635 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM38O00635 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM38O00635 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM38O00635 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM38O00635 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM38O00635 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM38O00635 AC010266.2-201ENST00000564741 3255 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
TRIM38O00635 RNA5SP234-201ENST00000363916 119 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM38O00635 RNU1-136P-201ENST00000384181 164 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AC009804.1-201ENST00000400949 179 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AC233289.1-201ENST00000403700 508 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 HNRNPDP2-201ENST00000406475 478 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM38O00635 GPS2P1-201ENST00000411761 986 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AC013404.1-201ENST00000413068 249 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM38O00635 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM38O00635 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM38O00635 TCEA1P2-201ENST00000420496 906 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AL133173.1-201ENST00000423458 397 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 MGAT2P2-201ENST00000427194 797 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM38O00635 AC092634.2-201ENST00000428146 1010 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AC114973.1-201ENST00000429057 632 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AL136231.1-201ENST00000429407 730 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 Z77249.1-201ENST00000444622 1175 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM38O00635 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM38O00635 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM38O00635 Z95152.1-201ENST00000453556 656 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM38O00635 snoU109.3-201ENST00000459477 145 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 RPL7P48-201ENST00000461513 746 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 OR2AO1P-201ENST00000476497 403 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AC104982.1-201ENST00000478775 574 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM38O00635 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM38O00635 RN7SL30P-201ENST00000488416 306 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM38O00635 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM38O00635 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM38O00635 AC006499.3-201ENST00000506077 748 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM38O00635 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM38O00635 MTCO3P28-201ENST00000513351 515 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM38O00635 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM38O00635 AC025260.1-201ENST00000548858 430 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM38O00635 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM38O00635 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM38O00635 AGGF1P7-201ENST00000562369 913 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
TRIM38O00635 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM38O00635 AC022884.3-201ENST00000579571 248 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM38O00635 AC091057.3-201ENST00000602684 733 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AC002069.2-201ENST00000603580 883 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AC122108.2-201ENST00000611946 526 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 AC118658.2-201ENST00000618697 459 ntBASIC5.59□□□□□ -1.51
TRIM38O00635 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM38O00635 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM38O00635 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TRIM38O00635 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM38O00635 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM38O00635 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM38O00635 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM38O00635 MFSD8-239ENST00000641590 2479 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM38O00635 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM38O00635 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM38O00635 RNU5E-10P-201ENST00000363506 118 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 RNA5SP27-201ENST00000363839 119 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 SNORA62.2-201ENST00000364672 152 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM38O00635 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM38O00635 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM38O00635 RNU6-932P-201ENST00000391108 106 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM38O00635 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM38O00635 RNU6-584P-201ENST00000410350 95 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 AC106883.1-201ENST00000418805 562 ntBASIC5.58□□□□□ -1.52
TRIM38O00635 MTND2P16-201ENST00000419987 799 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms