Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AC046176.1-201ENST00000435260 1170 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 RPL12P3-201ENST00000440080 396 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 OR52E3P-201ENST00000452083 936 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 CBX1P2-201ENST00000453841 458 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 MTND2P30-201ENST00000456663 382 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AC027338.1-201ENST00000514840 825 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 RN7SKP157-201ENST00000516174 282 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 NMNAT1P1-201ENST00000554095 876 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AC122134.1-201ENST00000565664 1104 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 MIR4646-201ENST00000580775 63 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 MIR4443-201ENST00000585052 53 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 BNIP3P27-201ENST00000599991 412 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AC091932.2-201ENST00000623014 291 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 AL592494.2-201ENST00000425455 1548 ntBASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX9Q9Y5X1 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC087565.3-202ENST00000642085 1603 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 RN7SKP97-201ENST00000410966 333 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC073508.1-201ENST00000428866 656 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AL354714.3-201ENST00000447284 493 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 IGHV5-78-201ENST00000450948 295 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 RPL7P61-201ENST00000451721 751 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 RNA5SP43-201ENST00000516559 110 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 MTND1P6-201ENST00000523621 946 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AP003102.1-201ENST00000525638 661 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC027281.1-201ENST00000574178 758 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 MIR3936-201ENST00000584304 110 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 PRPF19P1-201ENST00000584766 898 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC108359.1-201ENST00000616451 1211 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC074276.2-201ENST00000619891 348 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 AC131971.1-201ENST00000332881 1482 ntBASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.42□□□□□ -1.54
SNX9Q9Y5X1 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 AC063976.2-201ENST00000425667 3556 ntBASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX9Q9Y5X1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms