Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC134882.1-201ENST00000603738 1676 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AL355834.1-201ENST00000556602 3965 ntBASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL4A3BPQ9Y5P4 AC232271.1-201ENST00000602455 2715 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 CIR1P2-201ENST00000514821 1342 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 ASNSP1-204ENST00000641977 1664 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 SNORA51.1-201ENST00000363243 140 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 RNU4-68P-201ENST00000364314 141 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 RNU1-136P-201ENST00000384181 164 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC005297.1-201ENST00000444765 862 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 MTND1P33-201ENST00000446251 917 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 RPS3AP15-201ENST00000483874 781 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 RPS7P6-201ENST00000485777 579 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC134050.1-201ENST00000495088 933 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AL136038.1-201ENST00000497246 351 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC118282.2-201ENST00000508739 374 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC063977.5-201ENST00000601044 974 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 FO393422.1-201ENST00000603908 708 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC009027.1-201ENST00000604510 479 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC104695.2-201ENST00000605056 775 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC010200.2-201ENST00000605098 235 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC099676.1-201ENST00000608886 657 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 MIR6886-201ENST00000619864 61 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AL390318.1-201ENST00000624564 687 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 AL049767.1-202ENST00000637826 242 ntBASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL4A3BPQ9Y5P4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL4A3BPQ9Y5P4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL4A3BPQ9Y5P4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
COL4A3BPQ9Y5P4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.4
COL4A3BPQ9Y5P4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL4A3BPQ9Y5P4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.34□□□□□ -1.4
COL4A3BPQ9Y5P4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
COL4A3BPQ9Y5P4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 SRRM1P3-201ENST00000426911 2678 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 U3.25-201ENST00000391209 220 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 Z75741.2-201ENST00000417272 1167 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 RPS3AP37-201ENST00000419176 745 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AL121776.1-201ENST00000429337 372 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 AC073909.1-201ENST00000447112 999 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 RPS6P2-201ENST00000454208 705 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 PTGES3P5-201ENST00000455109 434 ntBASIC6.33□□□□□ -1.4
COL4A3BPQ9Y5P4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms