Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 ATP5HP3-201ENST00000396994 486 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AC013442.1-201ENST00000397347 228 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 LRRC37BP1-201ENST00000398851 714 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AC093162.1-201ENST00000419682 124 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 NPM1P22-201ENST00000427761 952 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AP000936.3-201ENST00000438127 255 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 NPM1P39-201ENST00000449818 867 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AL691482.1-201ENST00000453255 87 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 RN7SL826P-201ENST00000479724 288 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 COX6B1P5-201ENST00000509843 249 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AC004980.4-201ENST00000513375 203 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AC067904.2-201ENST00000517322 1283 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AC013701.1-201ENST00000522657 465 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 OR7E128P-201ENST00000532736 1024 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AL118556.2-201ENST00000614375 824 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 BX005214.3-202ENST00000619809 325 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AP002799.1-201ENST00000623552 423 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 RPL23AP61-201ENST00000623642 466 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AP000648.2-201ENST00000624182 404 ntBASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
ATG4BQ9Y4P1 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC011447.7-201ENST00000624228 1590 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC016769.2-201ENST00000414815 475 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC013429.2-201ENST00000418798 781 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC006455.6-201ENST00000426192 893 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 RNF19BPX-201ENST00000426224 625 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 PA2G4P6-201ENST00000438325 1197 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AL035551.1-201ENST00000446931 348 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 COX6B1P2-201ENST00000489624 230 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 RN7SL244P-201ENST00000493405 297 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC108157.1-201ENST00000510511 539 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 ACTR6P1-201ENST00000514311 1104 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 RNU6-760P-201ENST00000516078 97 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 RNA5SP43-201ENST00000516559 110 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 NMNAT1P1-201ENST00000554095 876 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 MIR4691-201ENST00000583764 85 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 MIMT1-201ENST00000597105 1050 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 KATNBL1P1-201ENST00000605192 748 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC012467.1-201ENST00000607740 256 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC135803.1-201ENST00000608748 565 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC093799.2-201ENST00000610062 578 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 AC090510.2-201ENST00000617465 629 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 SOCS5P3-201ENST00000425115 1576 ntBASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4BQ9Y4P1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms