Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 BRD9P1-201ENST00000529855 560 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AC006349.1-201ENST00000555526 235 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AGGF1P9-201ENST00000561884 913 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 MIR3934-201ENST00000579806 107 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AC015911.5-201ENST00000587076 451 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AC026979.4-201ENST00000606555 645 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AC016957.2-201ENST00000616998 848 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 MIR6730-201ENST00000622213 67 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AC010872.1-201ENST00000624225 675 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AC073136.1-201ENST00000449426 2884 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 ZNF652P1-201ENST00000442420 1309 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AC011755.1-201ENST00000623763 2049 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 MAPK10-328ENST00000641553 4009 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AC110792.3-201ENST00000595906 1614 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 RN7SKP149-201ENST00000363008 344 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 RNU6-925P-201ENST00000384629 104 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 RNA5SP345-201ENST00000410646 108 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 CYCSP24-201ENST00000445119 316 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 OR52J1P-201ENST00000450596 932 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AL356981.1-201ENST00000454879 684 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AC090543.1-201ENST00000492168 485 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AC105233.1-201ENST00000498840 781 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 PCNAP1-201ENST00000505363 709 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AC108157.1-201ENST00000510511 539 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 RNU6-491P-201ENST00000516099 110 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 OR1AB1P-201ENST00000585564 761 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 ABI1P1-201ENST00000603375 1120 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AC120053.1-201ENST00000607706 736 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AL049539.1-201ENST00000611964 459 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AL049777.1-201ENST00000622740 518 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AC073869.10-201ENST00000642016 354 ntBASIC5.28□□□□□ -1.56
SIX4Q9UIU6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SIX4Q9UIU6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.56
SIX4Q9UIU6 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC132825.1-201ENST00000463573 2247 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 RNA5SP191-201ENST00000362585 102 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 RNA5SP187-201ENST00000384400 119 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 U3.23-201ENST00000391132 200 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 RSL24D1P1-201ENST00000404972 493 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC004074.1-201ENST00000421810 1063 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 RPS27P18-201ENST00000431701 247 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms