Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SCN11AQ9UI33 NDUFA5P1-201ENST00000433858 341 ntBASIC5.9□□□□□ -1.47
SCN11AQ9UI33 AC010618.1-201ENST00000469924 477 ntBASIC5.9□□□□□ -1.47
SCN11AQ9UI33 AC041039.1-201ENST00000485656 536 ntBASIC5.9□□□□□ -1.47
SCN11AQ9UI33 AC098799.3-201ENST00000506095 438 ntBASIC5.9□□□□□ -1.47
SCN11AQ9UI33 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
SCN11AQ9UI33 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.9□□□□□ -1.47
SCN11AQ9UI33 MIR492-201ENST00000638676 116 ntBASIC5.9□□□□□ -1.47
SCN11AQ9UI33 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SCN11AQ9UI33 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.9□□□□□ -1.47
SCN11AQ9UI33 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SCN11AQ9UI33 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 AL137141.1-201ENST00000624622 4836 ntBASIC5.89□□□□□ -1.47
SCN11AQ9UI33 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 AC009506.2-201ENST00000420635 840 ntBASIC5.89□□□□□ -1.47
SCN11AQ9UI33 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.89□□□□□ -1.47
SCN11AQ9UI33 RPL7P19-201ENST00000469948 618 ntBASIC5.89□□□□□ -1.47
SCN11AQ9UI33 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 AC090515.3-201ENST00000560431 315 ntBASIC5.89□□□□□ -1.47
SCN11AQ9UI33 MIR4429-201ENST00000580105 73 ntBASIC5.89□□□□□ -1.47
SCN11AQ9UI33 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 AC018628.1-201ENST00000624147 3819 ntBASIC5.89□□□□□ -1.47
SCN11AQ9UI33 AC100778.3-201ENST00000580060 1750 ntBASIC5.89□□□□□ -1.47
SCN11AQ9UI33 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCN11AQ9UI33 AC108467.2-201ENST00000617640 1597 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AL022722.2-201ENST00000402519 180 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC114755.5-201ENST00000447760 831 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 CR383656.1-201ENST00000484916 377 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC005261.2-201ENST00000593427 4258 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC109446.4-201ENST00000623235 2755 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 RNA5SP366-201ENST00000365454 123 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 NRBF2P2-201ENST00000413087 861 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AL158073.1-201ENST00000426848 1104 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 BMS1P19-201ENST00000433925 393 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AL157385.1-201ENST00000446973 268 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 SNORA84-201ENST00000459229 133 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC091167.1-201ENST00000492017 396 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC106806.2-201ENST00000509365 500 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 NPM1P6-201ENST00000521088 871 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 OR8A2P-201ENST00000528631 952 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AC130352.1-201ENST00000602979 661 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 AL031658.2-201ENST00000616850 651 ntBASIC5.88□□□□□ -1.47
SCN11AQ9UI33 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.88□□□□□ -1.47
SCN11AQ9UI33 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SCN11AQ9UI33 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCN11AQ9UI33 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN11AQ9UI33 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
SCN11AQ9UI33 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCN11AQ9UI33 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.87□□□□□ -1.47
SCN11AQ9UI33 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.87□□□□□ -1.47
SCN11AQ9UI33 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.87□□□□□ -1.47
SCN11AQ9UI33 RPL23AP52-201ENST00000439311 478 ntBASIC5.87□□□□□ -1.47
SCN11AQ9UI33 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCN11AQ9UI33 TCEA1P3-201ENST00000443005 880 ntBASIC5.87□□□□□ -1.47
SCN11AQ9UI33 AL935212.3-201ENST00000450729 284 ntBASIC5.87□□□□□ -1.47
SCN11AQ9UI33 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.87□□□□□ -1.47
SCN11AQ9UI33 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.87□□□□□ -1.47
SCN11AQ9UI33 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms