Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 U3.53-201ENST00000628922 216 ntBASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 ZNF137P-201ENST00000456718 1920 ntBASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 AL442128.2-201ENST00000620246 1824 ntBASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 TCP1P3-201ENST00000414406 1498 ntBASIC6.32□□□□□ -1.4
NPC1L1Q9UHC9 AL592182.3-201ENST00000642132 3304 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 EIF4A1P1-201ENST00000420241 934 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 SETP9-201ENST00000423837 832 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 RPS26P4-201ENST00000431743 355 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 AL031584.1-201ENST00000447169 754 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 OR8A2P-201ENST00000528631 952 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 HMGN2P47-201ENST00000559378 272 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 RNF138P2-201ENST00000603490 592 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 OR7A19P-201ENST00000608051 733 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 AC009704.2-201ENST00000618739 483 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 MIR6758-201ENST00000620653 63 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 AC005261.2-201ENST00000593427 4258 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 AC097461.1-201ENST00000568928 2821 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 OR4K15-201ENST00000305051 1216 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 RN7SKP74-201ENST00000362849 309 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 GNG5P5-201ENST00000420444 220 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 RPL36AP10-201ENST00000421785 322 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 RPL21P43-201ENST00000425440 472 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 ISCUP1-201ENST00000454451 448 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 AC115286.1-201ENST00000604298 434 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 AL359757.1-201ENST00000623176 255 ntBASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NPC1L1Q9UHC9 OR14L1P-202ENST00000641545 3009 ntBASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 AL592148.3-201ENST00000608771 2646 ntBASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 AC021146.4-201ENST00000309229 279 ntBASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 RPS3AP23-201ENST00000401762 784 ntBASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 CYCSP34-201ENST00000458172 304 ntBASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 MIR3936-201ENST00000584304 110 ntBASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPC1L1Q9UHC9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 MIR129-1-201ENST00000384972 72 ntBASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 GLULP6-201ENST00000399502 913 ntBASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 RN7SKP106-201ENST00000410832 272 ntBASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 AL935212.3-201ENST00000450729 284 ntBASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 AL591473.1-201ENST00000464297 313 ntBASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 STRADBP1-201ENST00000478954 1281 ntBASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 AC068587.1-201ENST00000483613 781 ntBASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 GTF2IP11-201ENST00000526931 420 ntBASIC6.29□□□□□ -1.4
NPC1L1Q9UHC9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms