Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DKK3Q9UBP4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
DKK3Q9UBP4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
DKK3Q9UBP4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
DKK3Q9UBP4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DKK3Q9UBP4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DKK3Q9UBP4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.68□□□□□ -1.5
DKK3Q9UBP4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
DKK3Q9UBP4 KYNUP3-201ENST00000574386 1341 ntBASIC5.68□□□□□ -1.5
DKK3Q9UBP4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DKK3Q9UBP4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
DKK3Q9UBP4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DKK3Q9UBP4 TRIM51GP-201ENST00000534741 1350 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 RBPJP2-201ENST00000618187 1444 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 RNA5SP132-201ENST00000364725 118 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 RN7SKP124-201ENST00000364730 341 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 RNU1-136P-201ENST00000384181 164 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 RPS24P7-201ENST00000416921 246 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 BTF3P9-201ENST00000418784 283 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AL133173.1-201ENST00000423458 397 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 BX276092.6-201ENST00000430476 250 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC092647.3-201ENST00000443044 633 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 OR6K5P-201ENST00000447050 945 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC092155.2-201ENST00000454675 477 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 RPL12P39-201ENST00000455456 496 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 BX276092.8-201ENST00000455722 250 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC026414.1-201ENST00000504046 698 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 DUTP7-201ENST00000507982 486 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC015720.2-201ENST00000567709 334 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC080013.6-201ENST00000606185 215 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 VN1R9P-201ENST00000614184 867 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 FRG1EP-201ENST00000634469 770 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 MFSD8-213ENST00000641134 1327 ntBASIC5.67□□□□□ -1.5
DKK3Q9UBP4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.67□□□□□ -1.5
DKK3Q9UBP4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 AC099786.3-201ENST00000565735 1410 ntBASIC5.66□□□□□ -1.5
DKK3Q9UBP4 AL359715.4-201ENST00000606629 1436 ntBASIC5.66□□□□□ -1.5
DKK3Q9UBP4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 RN7SKP216-201ENST00000411050 312 ntBASIC5.66□□□□□ -1.5
DKK3Q9UBP4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.66□□□□□ -1.5
DKK3Q9UBP4 RPS27AP6-201ENST00000427962 448 ntBASIC5.66□□□□□ -1.5
DKK3Q9UBP4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.66□□□□□ -1.5
DKK3Q9UBP4 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.66□□□□□ -1.5
DKK3Q9UBP4 VN1R40P-201ENST00000455196 941 ntBASIC5.66□□□□□ -1.5
DKK3Q9UBP4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 IGLV3-24-201ENST00000517477 197 ntBASIC5.66□□□□□ -1.5
DKK3Q9UBP4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.66□□□□□ -1.5
DKK3Q9UBP4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms