Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 NDUFA5P9-201ENST00000472609 340 ntBASIC4.52□□□□□ -1.69
CCDC88CQ9P219 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 RN7SL652P-201ENST00000577769 300 ntBASIC4.52□□□□□ -1.69
CCDC88CQ9P219 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.52□□□□□ -1.69
CCDC88CQ9P219 AC004232.3-201ENST00000622977 525 ntBASIC4.52□□□□□ -1.69
CCDC88CQ9P219 AC015871.5-202ENST00000623252 701 ntBASIC4.52□□□□□ -1.69
CCDC88CQ9P219 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 RPL21P108-201ENST00000413857 481 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC004690.1-201ENST00000418216 328 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 RPS27AP7-201ENST00000422792 455 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AL672167.3-201ENST00000465951 960 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC104763.1-201ENST00000475274 360 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 RNU2-30P-201ENST00000516209 141 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC005868.1-201ENST00000536421 331 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC016839.1-201ENST00000578162 867 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC068790.4-201ENST00000602474 263 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 DDX18P5-201ENST00000534547 1306 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC017079.1-201ENST00000333650 415 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC136624.1-201ENST00000400791 413 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC017078.1-201ENST00000416146 368 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC016831.4-201ENST00000438302 307 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 AC108145.1-201ENST00000503770 153 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 GTF2IP11-201ENST00000526931 420 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC88CQ9P219 DHX9P1-201ENST00000436565 3076 ntBASIC4.51□□□□□ -1.69
CCDC88CQ9P219 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 RNU2-50P-201ENST00000410494 143 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AL451139.1-201ENST00000434718 346 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 GTF3AP5-201ENST00000442645 697 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AC068831.8-201ENST00000620171 435 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 SNORD113.2-201ENST00000364166 89 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 VN1R37P-201ENST00000419096 748 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 OR5M12P-201ENST00000423388 929 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 RPS17P8-201ENST00000434525 335 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 OR1H1P-201ENST00000448731 937 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AC112206.1-201ENST00000468416 477 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AC007016.1-201ENST00000512110 244 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 RN7SKP92-201ENST00000517266 244 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AC026688.1-201ENST00000520639 1168 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 OR8A2P-201ENST00000528631 952 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 BGLT3-201ENST00000564523 994 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 RBPJP2-201ENST00000618187 1444 ntBASIC4.5□□□□□ -1.69
CCDC88CQ9P219 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC88CQ9P219 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.49□□□□□ -1.69
CCDC88CQ9P219 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC88CQ9P219 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms