Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL672167.1-205ENST00000641112 3080 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 AL672167.2-201ENST00000377164 879 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 SNORA68.2-201ENST00000391263 128 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 COX6B1P1-201ENST00000415962 213 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 FABP7P1-201ENST00000424004 391 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 NPM1P39-201ENST00000449818 867 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 AL356390.1-201ENST00000455684 397 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 RPL7P16-201ENST00000479738 738 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 RN7SL214P-201ENST00000487317 265 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 AC025164.1-201ENST00000496249 478 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 RN7SKP34-201ENST00000516142 244 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 SCARNA21.2-201ENST00000516600 166 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 AC209154.1-201ENST00000582156 337 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 AC005520.3-201ENST00000602874 370 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 AC016252.1-201ENST00000609721 474 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 AL355480.1-201ENST00000629041 99 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 AL022322.2-201ENST00000624072 20397 ntBASIC4.72□□□□□ -1.65
TREX1Q9NSU2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TREX1Q9NSU2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.65
TREX1Q9NSU2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TREX1Q9NSU2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
TREX1Q9NSU2 AC126323.6-202ENST00000568092 3511 ntBASIC4.71□□□□□ -1.65
TREX1Q9NSU2 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TREX1Q9NSU2 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TREX1Q9NSU2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 OR56B2P-201ENST00000317102 954 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 RNA5SP191-201ENST00000362585 102 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 SNORA74A-201ENST00000364089 198 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 RN7SKP224-201ENST00000364140 325 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AL645927.1-201ENST00000396783 406 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 RNA5SP113-201ENST00000410486 84 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 RSU1P3-201ENST00000412878 835 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AC004074.1-201ENST00000421810 1063 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 NPM1P48-201ENST00000436002 853 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 Z80107.2-201ENST00000445127 392 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 SUMO2P1-206ENST00000445436 284 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AC108463.1-201ENST00000450258 347 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AC026348.1-201ENST00000462549 1053 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 RPL23AP37-201ENST00000479658 549 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AC005000.1-201ENST00000536192 288 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 COX6CP4-201ENST00000605798 228 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AC133644.2-201ENST00000608142 540 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 BNIP3P41-202ENST00000616656 861 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 RBPJP2-201ENST00000618187 1444 ntBASIC4.71□□□□□ -1.66
TREX1Q9NSU2 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TREX1Q9NSU2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TREX1Q9NSU2 MIR323B-201ENST00000385269 82 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 MIR921-201ENST00000401133 56 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AL589647.1-201ENST00000402485 466 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 AL591848.1-201ENST00000413092 322 ntBASIC4.7□□□□□ -1.66
TREX1Q9NSU2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms