Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RAB28P3-201ENST00000448325 597 ntBASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 RN7SL817P-201ENST00000480777 288 ntBASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 RPS21P4-201ENST00000487122 248 ntBASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 RN7SL30P-201ENST00000488416 306 ntBASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 AL133372.1-201ENST00000493565 745 ntBASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 AC104971.1-201ENST00000495117 578 ntBASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 AC022882.1-201ENST00000532142 501 ntBASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 AC024940.3-201ENST00000538551 316 ntBASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 AC087783.2-201ENST00000605070 562 ntBASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 MTCO1P11-201ENST00000429111 1528 ntBASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 AC120338.1-201ENST00000625074 1541 ntBASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 AC015813.6-201ENST00000624409 5808 ntBASIC4.55□□□□□ -1.68
CCNB1IP1Q9NPC3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 CASC19-281ENST00000642118 1554 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 AL672167.1-205ENST00000641112 3080 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 RNA5SP183-201ENST00000362452 119 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 RNU1-94P-201ENST00000362627 173 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 RNU4-7P-201ENST00000364758 141 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 SNORA66-201ENST00000384792 133 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 SNORD96B-201ENST00000386148 79 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 LRRC37BP1-201ENST00000398851 714 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 AL136131.1-201ENST00000406079 803 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 RN7SKP126-201ENST00000411143 300 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 AC073136.2-201ENST00000417282 849 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 PPIAP13-201ENST00000434706 478 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 AL691482.1-201ENST00000453255 87 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 RN7SL443P-201ENST00000464331 290 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 AC022336.1-201ENST00000475510 337 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 RN7SL41P-201ENST00000476144 297 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 RPL23AP37-201ENST00000479658 549 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 AC024558.1-201ENST00000505008 528 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 PGAM1P13-201ENST00000507497 754 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 Y_RNA.719-201ENST00000517156 106 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 RPL26P30-202ENST00000602923 645 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 AC133552.5-201ENST00000604266 540 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 GMCL1P2-201ENST00000605230 823 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 AC000123.3-201ENST00000624029 4975 ntBASIC4.54□□□□□ -1.68
CCNB1IP1Q9NPC3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 ZNF733P-202ENST00000444809 1573 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 SNORA17.1-201ENST00000362945 126 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 MIR195-201ENST00000385194 87 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 MIR223-201ENST00000385204 110 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC092642.1-201ENST00000392417 425 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 HDGFP1-201ENST00000405943 252 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 RCC2P2-201ENST00000422174 918 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC093084.1-201ENST00000424233 687 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 RPS4XP16-201ENST00000427198 791 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AL450023.3-201ENST00000440592 271 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.53□□□□□ -1.68
CCNB1IP1Q9NPC3 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms