Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 IRF5P1-201ENST00000504852 2164 ntBASIC5.77□□□□□ -1.49
UPF2Q9HAU5 THAP12P4-201ENST00000528321 2266 ntBASIC5.77□□□□□ -1.49
UPF2Q9HAU5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 SNURFL-201ENST00000309296 343 ntBASIC5.77□□□□□ -1.49
UPF2Q9HAU5 RN7SKP115-201ENST00000363177 317 ntBASIC5.77□□□□□ -1.49
UPF2Q9HAU5 RN7SKP15-201ENST00000364742 309 ntBASIC5.77□□□□□ -1.49
UPF2Q9HAU5 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.77□□□□□ -1.49
UPF2Q9HAU5 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 AC023141.9-201ENST00000458734 412 ntBASIC5.77□□□□□ -1.49
UPF2Q9HAU5 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 ATP5G1P3-201ENST00000463301 410 ntBASIC5.77□□□□□ -1.49
UPF2Q9HAU5 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 AC020978.7-201ENST00000575953 1187 ntBASIC5.77□□□□□ -1.49
UPF2Q9HAU5 AC126915.2-201ENST00000610957 190 ntBASIC5.77□□□□□ -1.49
UPF2Q9HAU5 AC004477.3-201ENST00000614061 590 ntBASIC5.77□□□□□ -1.49
UPF2Q9HAU5 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.77□□□□□ -1.49
UPF2Q9HAU5 AC099654.2-201ENST00000433031 1980 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AC233968.1-201ENST00000611212 1300 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 RNA5SP132-201ENST00000364725 118 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 RNA5SP455-201ENST00000365190 119 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AC083799.1-201ENST00000366451 910 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AL589647.1-201ENST00000402485 466 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 RPL35AP24-201ENST00000413846 330 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 PRPF38AP2-201ENST00000438179 851 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 RPL12P11-201ENST00000439970 501 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AL163193.1-201ENST00000444895 788 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 OR52A4P-202ENST00000481634 799 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 RPS4XP1-201ENST00000482189 787 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 RN7SL214P-201ENST00000487317 265 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AC134698.5-201ENST00000519444 336 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AC011447.4-201ENST00000587562 111 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AC233280.2-201ENST00000603917 1070 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AL451049.1-201ENST00000608672 497 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 AC026124.2-201ENST00000621847 656 ntBASIC5.76□□□□□ -1.49
UPF2Q9HAU5 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
UPF2Q9HAU5 KARSP1-201ENST00000451871 1752 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 MIR143-201ENST00000385300 106 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 MTND3P20-201ENST00000407663 186 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AL513325.1-201ENST00000417716 1034 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 RSL24D1P8-201ENST00000434442 492 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 OR52B5P-201ENST00000435337 951 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 FCF1P7-201ENST00000451185 558 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AL389915.2-201ENST00000454576 441 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AC025164.1-201ENST00000496249 478 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 SNORD95-201ENST00000579879 68 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 RN7SL176P-201ENST00000580352 264 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AC209154.1-201ENST00000582156 337 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 MIR4310-201ENST00000582950 57 ntBASIC5.75□□□□□ -1.49
UPF2Q9HAU5 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.75□□□□□ -1.49
UPF2Q9HAU5 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms